Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3694 ATGGCCGAGGGCGGTGACAAAGACCATTCTGAtgccggtggtggtggtggtggcggcggcaaCAAAAAGTCACAGTCTCAAGAGGTTCAGGTTCAACCACACCCAGTGAGAGAGCAATTACCTGATGTTCAGTATTGCATTAACAGTCCTCCTCCTTGGCTTGAAGCAGTGGCATTGGGATTCCAGCATTATATTCTGACTCTTGGCATGACCGTTCTGATTCCAACTATAATTGTTCCTGAAATGGGTGGAGGCAATGCTGAGAAGGCCAAGGTGATACAGAATCTATTGTTTGCTTCTGGAGCAGGCACACTTGTGCAATCTTGGTTCGGAACAAGATTGCCAACTGTAGTTGTTGGTTCATACACTTACGTAATACCCACAATGTCAATTGCCTATGCTAAGAGATACAGTTCATATACAGATCCTTATGAGAGGTTCACTCACACAATTAGAGGGATACAAGGCGCCTTGATCATAAGTGCATGTTTCCATATAGCTATGGGATTCTTGGGCCTTTGGAGGAGTGCTGTCAGGTTCCTTAGCCCACTTTCTGTAGTCCCTTATGTAACTTTCACTGGAGTCGGTCTCTATCATCTTGGATTCCCAATGGTAAAAAAAATTTTAAATCCgttatttcttattcttaaattGTGGTCCATAATGTGTTTATTATCTTCTATGCTCCTGCAGTatcttaatcattttattagCACCAAGAAGCCTATATATGACCGATTTGCGGTGTTGTTTTCCATTGCAAGTGCATGGTTATTTGCACAGATTCTGACTTCAAGCACTGCATATAACAACAAGCCAGCAAGTACTCAGAATAGTTGCCGCACTGATCGTGCAGGTCTTATTAGTGCTGCTCCATGGGTATATCTCCCTTTTATACCCTTCCAATGGGGGAGGCCTACCTTCAACTGCGGAGAAGCTTTTGCTATGATAGCAGCTtcctttgtttctctttttgagTCTACTGGTACATTTTATGCTGCGGCAAGATATGGAAGTGGAACACCCGTGCCACCACATGTTCTCAGCCGCGGAACTGGCTGGGTGGTAAGATGCACTATATTTTGTAATTCTTTCTGGAATCATAAACAAGGAAACTTACAGTTGATTTTTAATGCTGGATTATTGGCATTGACAAGGGTGGGAAGCCGAAGAGTCATCCAAATATCAGCTGGCTTTATGATTTTCTTCTCTATATTTGGAAAATTTGGAGCAATTTTTGCTTCTATACCTTTGCCAATCATGGCAGCATTAAACTGTGTATTCTTCGGCTATGTCTCTTCTGCGGGTCTTGGTTTTCTCCAGTTCTGCAACCTCAACAGTTTCAGAACCAAATTCGTGTTGGGCTTGTCATTCTTCCTCGGCATCTCCATACCACAATATTTCATAGAATATTATCATGTAAAGCATCATGACGGATGGTTCAATGATATGGTTACCGTGATCTTCATGTCGCACACAACAGTGGCTGCGTTGGTTGCATTCATTTTGGACATCACACTCTCACGTGAAGATGATGCAGCCCGTAAGGACAGTGGTTTGCAGTGGTGGGAGAAGTTCAGTGTATATAATGCTGATGGTCGGAACGATGATTTCTATAAATTACCATGCAGAATGAATGAGCTCTTCCCCGCCCTTTAA 1659 0.4087 MAEGGDKDHSDAGGGGGGGGNKKSQSQEVQVQPHPVREQLPDVQYCINSPPPWLEAVALGFQHYILTLGMTVLIPTIIVPEMGGGNAEKAKVIQNLLFASGAGTLVQSWFGTRLPTVVVGSYTYVIPTMSIAYAKRYSSYTDPYERFTHTIRGIQGALIISACFHIAMGFLGLWRSAVRFLSPLSVVPYVTFTGVGLYHLGFPMVKKILNPLFLILKLWSIMCLLSSMLLQYLNHFISTKKPIYDRFAVLFSIASAWLFAQILTSSTAYNNKPASTQNSCRTDRAGLISAAPWVYLPFIPFQWGRPTFNCGEAFAMIAASFVSLFESTGTFYAAARYGSGTPVPPHVLSRGTGWVVRCTIFCNSFWNHKQGNLQLIFNAGLLALTRVGSRRVIQISAGFMIFFSIFGKFGAIFASIPLPIMAALNCVFFGYVSSAGLGFLQFCNLNSFRTKFVLGLSFFLGISIPQYFIEYYHVKHHDGWFNDMVTVIFMSHTTVAALVAFILDITLSREDDAARKDSGLQWWEKFSVYNADGRNDDFYKLPCRMNELFPAL 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3694 552 Pfam Permease family 56 468 IPR006043 GO:0016020|GO:0022857|GO:0055085
Ssu1g3694 552 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER 10-RELATED 16 551 - -
Ssu1g3694 552 MobiDBLite consensus disorder prediction 1 34 - -
Ssu1g3694 552 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 16 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3694 Ssu-Chr1 93148435 93152370 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g3694 30 551 Organic Solute Cotransporters AT1G65550 58.724 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3694 - - gmx:100800316 828.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3694 1 93148435 93152370 Ssu5g0336 5 7041318 7046702 PCT