Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3688 ATGAGGAAGGGGAAGGAGCAGAAGCAGAACAAGTTGGTGAGGATGATAACGACGCCGTTCAGAGTTTTGGGGAAAGCGAGGGACATGTACGTGAGGAGCATAACGAAGTGCGGTCACAACATGAATTATAGCAACCCCGTGGACGCTGCGGGGCGGTTCGAGGCTTTGCCGAGAAGCTACAGTACTGCCACGTCACGCTCTGACAACGAGGATTTCGCGGAGCTTTTGAGAGCGGCTTCCGCCAGGACTTTGGTGGACAGAATCGACGTGGATTTGGTTCTCAAACAGCAGCAGGCCCAGGCCCGCCCCGTTTCGTCCAATGGGTTGCCCAAGTCCACCAGCGTTGGCATGGGTCGGATCGACGAGGACACGCCTTATGATTTGGGCCAAGGGGATGTTCCCGTTGTGCCGAAATCGTATCCCAGAAGTAGAAGCTACGCGGTTGGAAAGACAAGTGCTGTTTTGTGA 468 0.5513 MRKGKEQKQNKLVRMITTPFRVLGKARDMYVRSITKCGHNMNYSNPVDAAGRFEALPRSYSTATSRSDNEDFAELLRAASARTLVDRIDVDLVLKQQQAQARPVSSNGLPKSTSVGMGRIDEDTPYDLGQGDVPVVPKSYPRSRSYAVGKTSAVL 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3688 155 PANTHER OS07G0123800 PROTEIN 1 155 - -
Ssu1g3688 155 PANTHER - 1 155 - -
Ssu1g3688 155 PIRSF UCP031279 1 155 IPR016972 -
Ssu1g3688 155 MobiDBLite consensus disorder prediction 98 113 - -
Ssu1g3688 155 MobiDBLite consensus disorder prediction 97 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3688 Ssu-Chr1 92972978 92973445 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3688 - - gmx:100785988 263.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3688 1 92972978 92973445 Ssu1g3688 1 92972978 92973445 ECH
Ssu5g0342 5 7120564 7121067 Ssu1g3688 1 92972978 92973445 PCT