Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3679 ATGGAATACAAGCCCAGTCTCTCCAAAGTCACTCATCCGAACAATGACGCAAGGCGCAGTAATTTAGTGTTACAACCTCCTCCACAATCATCATCCAGGAATGGACGCAATAAACAGCTTCGAGTTGAGGGTACAGAGGTTCCTTCTACTCTTTGTGCAGTTCAACCTACTTCCCTGAGAATTAGATTGTTTCGGTTGGAGAGTCAGAAAGGGGATCCTTTTGTCGATGCTTACAAGAAATGCACTCAAACCCCCAAAGTCCCCTTCATGCATAAACGGTCTATTAAGCTTAGGTTGCATTTAAAGGCATTAACTGATGAGCTTTGCAGCTCTCTTTGGGTGAATAAATTGGTGCTCAAACTTGGGGTTTCCATTGATTCTATGGAGGGTTAG 393 0.4377 MEYKPSLSKVTHPNNDARRSNLVLQPPPQSSSRNGRNKQLRVEGTEVPSTLCAVQPTSLRIRLFRLESQKGDPFVDAYKKCTQTPKVPFMHKRSIKLRLHLKALTDELCSSLWVNKLVLKLGVSIDSMEG 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3679 130 PANTHER T22J18.15-RELATED 2 97 - -
Ssu1g3679 130 MobiDBLite consensus disorder prediction 8 38 - -
Ssu1g3679 130 MobiDBLite consensus disorder prediction 1 42 - -
Ssu1g3679 130 PANTHER BNAA08G25910D PROTEIN 2 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3679 Ssu-Chr1 92803582 92806541 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3679 - K13146 pvu:PHAVU_009G074100g 112.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0352 5 7316774 7317241 Ssu1g3679 1 92803582 92806541 PCT