Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3670 ATGGACCTTGCTGCTCTGTTAACTTCTGCTGGAATGAATATCGCTGTCTGCGTGGTGCTCTTTTCACTCTATTCAGTACTAAGGAAACAGCCCAGCAATGTCAATGTGTACTTTGGAAGAAGGCTAGCTTCTCAGAGTTCAAAAAGCCGTGATATTTGTTTGGAAAGATTTGTTCCCTCTCCTACGTGGGTAATGAAAGCATGGGAACCAACTCAAGATGAAATGCTGACTATCGGTGGCTTGGATGCTGTGGTTTTTAACAGGATGGTTGTGTTCAGtATTCAAGTATTTTCTGTTGCTGCTGTCATCTGTTCTGTTCTAGTGCTTCCAGTAAATTATTATGGTCAGGACAGAATACATAAGGATATACCTTTTGAGTCACTGGAAGTATTTACCATTGAGAACGTTAAAAAAGGATCCAGATGGCTTTGGGCTCATTGTCTCGCTTTATACATCATAACTTTAACAActtgttttcttctttactGCGAATACAAGAGCATTACTAATTTGCGGCTAGTTCATATTACTGCATCGCCACCGAATCCTAGTCACTTTGCAATTCTTGTCCGAGGAATACCCTGGTCTCCAGAACAATCATACTGCGATACAGTGAAAaagtttttctcattttaccACTCATCAACATATTTGTCACACCAAATAGTGTATAAGTCTGGTGCAGTTCAAAACCTGAAGGATGACGCAGAATCCATGGGTAAGATATTGGAACAGACGTGTAAGCCAAGCTTTATGCAATGTTACTTTTGTGGAGGATCCGCTAATTCTTTTAAGATTATTTCTAATGAAATTGATAGTATACATGGGAGAACAGGCTACAGTGACCTGCATATAAATGCAAGAAAAAAGGAATGTGCAGCTGCTTTCGTGTTCTTTAAAAGTCGGTATGCTGCTCTTACGGTTGCCCAAAATCTCCACACATCAAATCCTATGTTATGGGTCACAGACCTAGCTCCTGAACCACAGGATGTTTACTGGTCTAACCTTTGCATACCATACAGGCAACTTTGGATCCGTAGGATATCTATATTTGTGGCTTCTATCACCTTCGTGCTTGTATTCCTTATCCCTGTCACATTCGCACAAGGCTTGACTCAACTGGACAAGCTTGAGAAAATGTTCCCTTTTCTGGCAGGGATGCTTCAAAAGAAATTTGTGATTCGGGTGGTGACTGGTTACTTGCCAagtgtgattttggttttatttttatatgctgTTCCACCAGTGATGATGCTATTCTCAACAGTGGAGGGATCTATTTCTCGTAGTAGAAGGAAGATTAGTGCTTGCACCAAAGTTTTGTACTTTACAATTTGGAATGTgttttttgttaatgtttttgCGGGGTCTGTTATCAGCCAACTCGCAGTCTTTAGTAGTATAACAGAACTACCTGCCCAACTTGCCAAGGCCGTCCCAGTGCAGGCTACCTTCTTCACAACATATGTTTTATCATCTGGTTGGGCAAGTTTGGCATTTGAAATTATGCAACTGTTTCCTCTTTTCTGCAATCTGTTCCAGAGATTCGTTCTCGGGCAGAAGGATGATTCAATGAATGGCAACCTAACTTTTCCATACCATACAGAAGTTCCAAGGATCTTACTGTTTGGATTCCTTGGGTTCACCTGTTCTATTCTGGCACCCCTAATATTGCCCTTCTTATTGTTTTACTTTATCCTTGCATACCTTGTTTATCGAAACCAGAttatcaatgtatatattagaaaatatgatAGCGGGGGACAGTTATGGCCCATTGCTCACAACACAACAGTCTTTTCGTTGCTCTTCGCTCAAATAGTTGCACTTGGGGTGTTTGGACTAAAAAGCTCAACAGTTGCATCCGGGTTTACCATTCCACTGCTGATTTGTACCATTCTATTTCACCAATATTGTAGGCAGCGATTTCTCCCAGTATTTAAGAACAATGCAACACAGGTTCTTATTGACATGGATCGGAGAGATGAGCGTTGTGGGAGAATGGAACAGATATATGAACAATTGCATTCAGAGTACTGCCAGTTCACTGGTTCTACTCAATCCGAATGTTTCAGCAGTCATCAAGGGGACAGGGAACTTGTGCGAACTCCACAAGATTTGGAGCCAGgTACGGAAATTAGCCAAGAAGATATATCATGGCCACCAGTTCTTCATAGTTTGAATTTGGACAAACCGGTACTTGGCGGCAAGATTCAGAATCCAGATAGAAGGGGacttgttattataaaaagaatgacAGATGAATTATGCTACAAGAGAAGTCGTCGTTTGGCTGTTGTCGGGGTTAGGGCATGCCCTGCCTATATGGCCTCAATCACGGATCGGTgttaa 2352 0.3975 MDLAALLTSAGMNIAVCVVLFSLYSVLRKQPSNVNVYFGRRLASQSSKSRDICLERFVPSPTWVMKAWEPTQDEMLTIGGLDAVVFNRMVVFSIQVFSVAAVICSVLVLPVNYYGQDRIHKDIPFESLEVFTIENVKKGSRWLWAHCLALYIITLTTCFLLYCEYKSITNLRLVHITASPPNPSHFAILVRGIPWSPEQSYCDTVKKFFSFYHSSTYLSHQIVYKSGAVQNLKDDAESMGKILEQTCKPSFMQCYFCGGSANSFKIISNEIDSIHGRTGYSDLHINARKKECAAAFVFFKSRYAALTVAQNLHTSNPMLWVTDLAPEPQDVYWSNLCIPYRQLWIRRISIFVASITFVLVFLIPVTFAQGLTQLDKLEKMFPFLAGMLQKKFVIRVVTGYLPSVILVLFLYAVPPVMMLFSTVEGSISRSRRKISACTKVLYFTIWNVFFVNVFAGSVISQLAVFSSITELPAQLAKAVPVQATFFTTYVLSSGWASLAFEIMQLFPLFCNLFQRFVLGQKDDSMNGNLTFPYHTEVPRILLFGFLGFTCSILAPLILPFLLFYFILAYLVYRNQIINVYIRKYDSGGQLWPIAHNTTVFSLLFAQIVALGVFGLKSSTVASGFTIPLLICTILFHQYCRQRFLPVFKNNATQVLIDMDRRDERCGRMEQIYEQLHSEYCQFTGSTQSECFSSHQGDRELVRTPQDLEPGTEISQEDISWPPVLHSLNLDKPVLGGKIQNPDRRGLVIIKRMTDELCYKRSRRLAVVGVRACPAYMASITDRC 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3670 783 Pfam Late exocytosis, associated with Golgi transport 6 163 IPR032880 -
Ssu1g3670 783 Pfam Cytosolic domain of 10TM putative phosphate transporter 186 335 IPR027815 -
Ssu1g3670 783 PANTHER PROBABLE MEMBRANE PROTEIN DUF221-RELATED 2 708 IPR045122 GO:0005227
Ssu1g3670 783 PANTHER ERD (EARLY-RESPONSIVE TO DEHYDRATION STRESS) FAMILY PROTEIN 2 708 - -
Ssu1g3670 783 Pfam Calcium-dependent channel, 7TM region, putative phosphate 346 613 IPR003864 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3670 Ssu-Chr1 92492763 92504964 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3670 K21989 - gmx:100789875 1291.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3670 1 92492763 92504964 Ssu1g3670 1 92492763 92504964 ECH
Ssu5g0366 5 7715375 7723812 Ssu1g3670 1 92492763 92504964 PCT