Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3658 atgAGTGAAGATGGGGATATTATTGACTGCGTCAATGTCTACAAACAACCTGCTTTTGACCATCCCGCCTTAAAAAATCACACTATTAAGATGATGCCCCATTTTTTGCGAGAATCCCAAAATTCAAGCACAAAAGAAGCTTCCCAGTCAGAGTCTGTTACATTTCGGACATGGCAGAAAAGTGGAAGTTGTCCAAATGGAACCGTCCCTATTCGCAGAATTCTAAAGGAGGACTTACTGAGAGTTGCTTCTGTTGACCGCTTCGGGCAGAAACCCCCTGCTGTGTTTAAGAATACAACAAATGGCTTCAACCTTAATTTCATCAACCCCAATGACTCCAAAGCATCATATCTTGTGACAATGGGATACAACTATATAGGTGCACAAGCGGATATTAACATTTGGAATCCAAAGGTTGACCTGCCAGACGATTTCACCACTGCTCAAATCTGGCTTAAGAACGGCAATGGTGCTGATTTTGAAAGCGTTGAAGCAGGCTGGACGGTGAATCCAAAGTTATATGGTGACAGGAAGACCCGGTTGTTTGCCTACGGGACTAGGGATTCATACAAGTCAATAGGTTGCTTTGATCTTACTTGCCCTGGGTTTGTGCAAACTGGCACCGAAGCAGCGCTTGGTGGCATCATAACTCCTGTGTCATCCCAATATGGCGAACAATATCAGCTTAACGTTGGAATGTTCTGGTCGCAGATAAAAAAGCAAACCCCTCACACGGGAACAGGGATGGGAAGTGGAGATTTTGCAAATGGTCTAAGGGGGAACGCATGCTACATGAGCAATGTGAGGATAAAGGATTATTCGCTTCAGCTTAAGTACCCTGAATTTGTGAGTGCAGCGGCTGATGAACCATACTGTTACAACTCCCTCAATTACATAAAAGGCTATGGAGTGGAACCCGTCCTCTATTTTGGAGGGCCCGGACGAAGACCTCCCTATTGTCCTTGA 966 0.4482 MSEDGDIIDCVNVYKQPAFDHPALKNHTIKMMPHFLRESQNSSTKEASQSESVTFRTWQKSGSCPNGTVPIRRILKEDLLRVASVDRFGQKPPAVFKNTTNGFNLNFINPNDSKASYLVTMGYNYIGAQADINIWNPKVDLPDDFTTAQIWLKNGNGADFESVEAGWTVNPKLYGDRKTRLFAYGTRDSYKSIGCFDLTCPGFVQTGTEAALGGIITPVSSQYGEQYQLNVGMFWSQIKKQTPHTGTGMGSGDFANGLRGNACYMSNVRIKDYSLQLKYPEFVSAAADEPYCYNSLNYIKGYGVEPVLYFGGPGRRPPYCP 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3658 321 PANTHER ASLB (DUF239)-RELATED 234 317 - -
Ssu1g3658 321 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 234 317 - -
Ssu1g3658 321 Pfam Neprosin activation peptide 2 96 IPR025521 -
Ssu1g3658 321 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 2 235 - -
Ssu1g3658 321 PANTHER ASLB (DUF239)-RELATED 2 235 - -
Ssu1g3658 321 Gene3D - 131 242 - -
Ssu1g3658 321 Pfam Neprosin 240 313 IPR004314 -
Ssu1g3658 321 Pfam Neprosin 143 234 IPR004314 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3658 Ssu-Chr1 92200975 92220970 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3658 - - gmx:100804570 432.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0377 5 8061312 8064720 Ssu1g3658 1 92200975 92220970 PCT