Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01757 ATGAATGACTATGGAACGGAGGAAGAACACCTTTTTATCTTTGATTCTACGTTGGAAGGTGAAGCCATCTTCCATGTTCACCCGCCGCCTGTAACAAGAACTGCTAGAACTGGAGACAGGCAGCAAGAGGGTACTTCCCTGTCTTTGTTGGGGGGCTATAAAGAGAAAGGCTTTGGGGCCAAAAGGGGGGTTGGTTCCCAGAAAAGCAGTGAAAGGAAGAACCTTGTAAACCCCGTCATTGTGAACAAGGTTCCTCATTATTCTCTCCCTTCTATCTTATCCGAACCACCCCACTTACTAGAAACTGCCACTCTTGCATTGTTTCTTTCTTGTACTGTTGTTGTCATCATTCTTAGTTTTATCAGAGGGCTAAAAGGGGGGTTTGTTCTGGCTTTGCGCATTGGACAAGGCAGAGGACTAGTTTCACTGACCAACTTAAAGGGTGGGAAAAATGAAGTATGTGCTGGTGACAGGTGGTGTTGTGAGTGGACTTGGGAAAGGAGTCACTGCCAGCAGTATTGGGCTGATCCTCAAGGCCTGTGGTCGAATACCCTTCTTCCTAATTCGGGAAACCCCTACTTGAACACTGATGCTGGAACAATGTCTCCTTTCGAGCATGGAGAGGTTTTCGTGTTAGATGATGGTGGTGAGTCTGTTATTGAGAAGGAGAGAAGAGGAGATTATCTTGGAAAGACTGTACAGGTTGTTCCACACATAACAGATGCTATCCAGGAGTGGATAGAACGTGTGGCAAAGATACCAGTTGACGGGAAAGAAGGACCAGCTGATGTTTGTGTCATTGAATTAGGTGGAACTATAGGGGATATTGAGTCCATGCCTTTTATTGAAGCACTTGGCCAGTTTTCATACCGTGTAGGCCCTGGCAACTTCTGTTCGGTTCATGTCAGCTTGGTTCCTATTCTCCATGTTGTTGGTGAACCGAAAACAAAGCCAACTCAGCACAGTGTTCGTCAACTTAGAGGATTAGGTTTGACCCCTAATCTTCTTGCTTGTCGCAGTTCGAAGGAACTTGATGACAATGTCAAGGCAAAACTTGCTCAATTTTGTCATGTGCCGCTGTCAAACATACTTACTCTCCATGATGTTCCAAACATTTGGCATATTCCTTTGCTGTTGAAAGACCAGAAGGCACATGAGGCGATCCTGAAAGCATTAAACTTGCTAGGTGTTGCTGCAGAGCCTAATTTGAAGGAGTGGACTGTAAGGACAAAAGTTTATGACAGATGTGATGAAATTGTTAGAATTGCAATGGTGGGAAAATACACTGGCCTTTCAGATGCATATCTTTCTGTTCTGAAGGCACTTCTACATGCTTCGGTTGCTCGAAAGCGTAAACTTATCGTGGACTGGGTTCCGGCTGGGGATCTTGAAGAAGTTACTCATAAAGAGGATCCTGAGGCATATAAAGCTGCATGGAATCTTTTAAAGGGTGCTCATGGGGTTCTAGTTCCAGGAGGTTTTGGTGATAGAGGAGTAGAGGGGAAAATTCTTGCTGCCAAGTATGCTCGAGAAAATAACGTTCCATTTCTGGGAATTTGCTTGGGGATGCAAATTGCTGTAATTGAGTTTGCACGATCTGTTCTAGGTCTGCTTGATGCTACTAGCACAGAGTTTAATACTGAAACCAAGACCCCTTGTGTCATATTTATGCCAGAAGGCTCAAAGACTCATATGGGGGCAACTATGCGACTTGGCTCAAGAAGAACCTACTTTGATGTTGCGGACTGCAAATCTGCAAAATTGTATGGCAATGTAAGCTTTATTGATGAGCGACATCGACATAGATATGAGGTCAATCCTGAGATGATATCACAGCTAGAGATTGCTGGTCTATCTTTTGTTGGCAAAGATGAAACTGGGAGGCGCATGGAAATAGTTGAATTGCCTAGCCATCCTTTTTATATTGGCGTTCAGTTTCACCCTGAGTTCAAGTCCAGACCAGGAAAACCTTCTCCACTCTTCTCAGGATTAATAGCAGCAGCAAGTGAACCAAGGAGGTTGGTGCCAAATGGTCACTCCAAGTTAACTGGGTGTAATATACCCTCACCAAAACTGAAACCACGCCCAAAAGGAAAGGTCTTCAAAGCACCCAATGGTTCCTTGAATGGTGTATATACCAATGGGAATGGCTATTACCAACTTGTTGATTTGAGTGCAAACTCTTTAATACATTTTGAATAA 2202 0.4405 MNDYGTEEEHLFIFDSTLEGEAIFHVHPPPVTRTARTGDRQQEGTSLSLLGGYKEKGFGAKRGVGSQKSSERKNLVNPVIVNKVPHYSLPSILSEPPHLLETATLALFLSCTVVVIILSFIRGLKGGFVLALRIGQGRGLVSLTNLKGGKNEVCAGDRWCCEWTWERSHCQQYWADPQGLWSNTLLPNSGNPYLNTDAGTMSPFEHGEVFVLDDGGESVIEKERRGDYLGKTVQVVPHITDAIQEWIERVAKIPVDGKEGPADVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCSVHVSLVPILHVVGEPKTKPTQHSVRQLRGLGLTPNLLACRSSKELDDNVKAKLAQFCHVPLSNILTLHDVPNIWHIPLLLKDQKAHEAILKALNLLGVAAEPNLKEWTVRTKVYDRCDEIVRIAMVGKYTGLSDAYLSVLKALLHASVARKRKLIVDWVPAGDLEEVTHKEDPEAYKAAWNLLKGAHGVLVPGGFGDRGVEGKILAAKYARENNVPFLGICLGMQIAVIEFARSVLGLLDATSTEFNTETKTPCVIFMPEGSKTHMGATMRLGSRRTYFDVADCKSAKLYGNVSFIDERHRHRYEVNPEMISQLEIAGLSFVGKDETGRRMEIVELPSHPFYIGVQFHPEFKSRPGKPSPLFSGLIAAASEPRRLVPNGHSKLTGCNIPSPKLKPRPKGKVFKAPNGSLNGVYTNGNGYYQLVDLSANSLIHFE 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01757 733 FunFam CTP synthase 417 680 - -
Spst5g01757 733 Gene3D - 219 414 IPR027417 -
Spst5g01757 733 Gene3D - 417 677 IPR029062 -
Spst5g01757 733 SUPERFAMILY Class I glutamine amidotransferase-like 420 670 IPR029062 -
Spst5g01757 733 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 421 674 - -
Spst5g01757 733 PANTHER CTP SYNTHASE 218 670 IPR004468 GO:0003883|GO:0006221
Spst5g01757 733 Gene3D - 187 218 IPR027417 -
Spst5g01757 733 Pfam Glutamine amidotransferase class-I 431 666 IPR017926 -
Spst5g01757 733 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 191 394 IPR027417 -
Spst5g01757 733 CDD GATase1_CTP_Synthase 420 665 IPR033828 GO:0003883|GO:0006241
Spst5g01757 733 Pfam CTP synthase N-terminus 191 217 IPR017456 GO:0003883|GO:0006221
Spst5g01757 733 Pfam CTP synthase N-terminus 218 394 IPR017456 GO:0003883|GO:0006221
Spst5g01757 733 NCBIfam CTP synthase (glutamine hydrolyzing) 218 667 IPR004468 GO:0003883|GO:0006221
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01757 Spst-Chr5 53350525 53364651 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01757 K01937 - gmx:100816167 967.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g00421 11 24833241 24841328 Spst5g01757 5 53350525 53364651 PCT