Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01735 ATGGTTAAGAGGGGAGTAATAGGATGCAACTATCCAGGAACAAAGGCTGAATTGAGAGGTTGCATTACTGATGTGTGGAGTATGAACAAGTGCCTCATCGACATATATGGTTTCTCACAAAAACACATTGTTGTTCTCATTGATACTCATCATTCCTACACCCAACCCACCGGCAAGAACATCAGATTCGCTCTGTCCAACCTCTTCCGGTCGGCCAAGCCCGGCGATGTCCTCTTCGTCCACTACAGTGGCCACGGCACGCGCCTTCCGGCCGAGGATGATGACGAAGACAACACCGGCTATGATGAATGCATTGTTCCGACAGATATGAATCTCATCACTGATGATGATTTCAGACAATTTGTAGACAAGGTCCCAAGGGGTTGCAGAATCACAATAGTTTCAGATTGCTGCCACAGTGGTGGCCTGATTGAAGCAGCGAAGGAACAAATAGGAGACAGCACAAACGAAGAAGGCCACAGTTCAAACTCTTTATTTCACTTCAAAAACTTCCTCCATCTAAACATGCAAGAAGAAAAAGAAGAAGAAGAAACCATTGTGAAGAACCGATCGTTGCCTCTCTCAACTCTCACAGACATACTCAAGCAGAAAAGTGGCAAAGACATAGAAACTGGGAAACTAAGGCACTCACTCTTCCGCATCTTTGGGGAAGATGTAAGCCCCAAAGTGAAGAAGTTCACAAATTTAGTCATGAACAAACTCCAACATGGAAAAAGTGGTGAGAGTGGAGGGCACGGAATTGTGGGGATCGGGAATCTTGCACAAAAATTCATTGAACAAAAGCTAAATGATGATGGTGATGAGATGGCAAAAAAACGTGGGGGGAGCAAGAAAGAGGAACATGCTGCATCAATCAAGCGCAATGTTTTGGATTGTGGGATTCTGCTGAGTGGTTGCCAGAGTGACCAAACTTCTGCAGATGCAAGTCCTGGTGGAAATTCTGGATCAGCTTATGGGGCTTTCAGCAATGTAATTAAGGGTATAATTGAAGAGAGTGAAGGCGCAGTGACAAACCGGGAGCTTGTGCTGAAGGCTAGGATGATGCTTAAGAGGCAGGGTTTTTCTCAGAAGCCTGGTCTCTATTGCAGTGACAGCAATGTTAATGCTTCCTTTGTGTGTTGA 1143 0.4523 MVKRGVIGCNYPGTKAELRGCITDVWSMNKCLIDIYGFSQKHIVVLIDTHHSYTQPTGKNIRFALSNLFRSAKPGDVLFVHYSGHGTRLPAEDDDEDNTGYDECIVPTDMNLITDDDFRQFVDKVPRGCRITIVSDCCHSGGLIEAAKEQIGDSTNEEGHSSNSLFHFKNFLHLNMQEEKEEEETIVKNRSLPLSTLTDILKQKSGKDIETGKLRHSLFRIFGEDVSPKVKKFTNLVMNKLQHGKSGESGGHGIVGIGNLAQKFIEQKLNDDGDEMAKKRGGSKKEEHAASIKRNVLDCGILLSGCQSDQTSADASPGGNSGSAYGAFSNVIKGIIEESEGAVTNRELVLKARMMLKRQGFSQKPGLYCSDSNVNASFVC 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01735 380 PANTHER METACASPASE-4 6 378 - -
Spst5g01735 380 Gene3D - 4 191 - -
Spst5g01735 380 Gene3D - 265 379 - -
Spst5g01735 380 Pfam Caspase domain 6 373 IPR011600 GO:0004197|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01735 Spst-Chr5 53001594 53003491 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01735 - - vum:124829585 581.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g01735 5 53001594 53003491 Spst5g01735 5 53001594 53003491 ECH
Spst5g01735 5 53001594 53003491 Spst11g00425 11 24960277 24963134 PCT