Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01718 ATGTCTCTCTCACGCCTCATCACTCCTCTCTGCTGCACTTCTTCAACTTCAGATTCTATGGTGACTACATCATATGCGAAGGAGAAAATGGAGAATACATCCTGGTGCCGTGTGGACTTAAAAGAAAGAATCAGGAAAATGTTCAACAAGGTTGAACTTTCTGTTTCTTCATATGATACAGCTTGGGTGGCAATGATACCCTCTCCAGCTTCTCCTCATACCCCACTTTTCCCTGAGTGCTTAAATTGGTTGTTGGGTAATCAACTCTTAGATGGTTCCTGGGGTCTTCCTGATCGCCACCCATTACTAATGAATGATGCTCTCTTATCTACCTTAGCATGCATCCTTGCTCTAAAGCAATGGGGTGTTGGAGAAGATCAAATTAACAGGGGTCTTCAGTTTATTGAGTCAAACATTACTTCAATTAATGATGAGAAGCAACACCCTCCCCTAGGATTTGAAATAAATTTTCCTTCTTTGATCGAATATGCACAAAATTTGGGCATTAAGCTTCCAATTGGAGCTACAAGCTTGGAAACAATGATGCAGAACAGAGAATTAGAGATCCAAAGAGGTATTCAAAGCAATTCAGAAGGGTGGAGAGCATATCAAGCATATCTTTCAGAAGGAATGCTGGACTCACAAGACTGGAAAACAATCATGAAGTATCAAAGAAAGAATGGATCTTTGTTTAATTCACCTGCTACAACAGCAGCTGCTTTTCAGCGCCTTAAGAATGCTGAATGTCTTGGTTACCTTCAATCTGTATTAGAAAAGTTTGGAAATGCAGTTCCGACAGTTTACCCTCTGGATATATATGCTCGTCTCTATATGATTGATAGTCTAGAAAGGTTGGGTATTAATCATCATTTCAAAGAGGAAATTCGTAGTGTATTGGATGATACATACAGATATTGGGTGCAAGGAGTGGATGATATATTCTTGGATCCCACCACCTGTGCAATGGCATTTCGAATGTTACGTCTCAATGGCTATGATGTATCTTCAGATCCATTTTATCAATATTCTGAAGATAAATTTGCTGACTCCCTGAAAGGGTACTTGAAGGATGTTGGTGCTGTTATAGAGCTATATAGGGCTTCACAAGCCATTATACACCCTGATGAATCAATTTTGGTGAGACAGAGTTTGTGGACGAAACAACTTCTGAAGCAGGAATCCTCGCCTTACAGATTATATGCTGATAAACTTCAAAGTTATGTCGACCTAGAGGTCAAGGATGTTCTTAATTTCCCTTATCATGCCAATTTGGAGCGGTTGTTAAACAGGAGATCGATGGAGCATTACAATGTAGAAGAAACAAGAATTTTAAAATCATCTTATAGATCTGGCAATTTTGCAAACCAAGAAATTCTAAAGCTTGCAGTAGAAGACTTCAATATCTGCCAATTAATACACATTGAAGAGTTGAAACAGCTTTCAAGATGGGTTGTCGAGAACAGACTGGACAAACTAAAATTTGCCAGGCAGAAACTGGCCTATTGTTACTTCTCTGTAGCAGCTACACTTTTCTCCTCTGAACTTTCTGATGCTCGCATATCCTGGGCGAAAAATGGGGTGCTCACAACAGTTGTTGATGATTTCTTTGATGTTGGGGGCTCTGAAGAGGAACTAGTGGACCTTATTCAACTAGTTGAGAAGTGGGATGTAGATATCAACACTGTTTCTTGTTCTGAAACAGTTAAGATTATATTTTCCGCAATTCACAGCACAGTTTGTGAGATTGGAGAGAAGTCAGTCAAGTGGCAAGGACGCAATGTGAAAAACAATGTTATCAAGATTTGGTTGAATTTGATTCAATCAATGTATAGAGAAGCTGAGTGGTTGAGAACCAATACTGTGCCAACAATTGATGATTATATGGAAAATGCATACATATCATTTGCCTTGGGTCCAATTGTCCTTCCTGCCCTCTATCTTGTTGGACCAAAGCTTTCCGATGGAGATGCTGAAAGTCATGAGTTGAACCATCTGTATAAGCTAATGAGCACATGCGGTCGTCTTCTTAATGACATTCGTAGTTTCAAGAGAGAATTTGAGGAAGGGAAATTGAATGCACTGGCTTTGCACATTGCTCATGGCAATGGAGTTTTAACTGCCGAAGATGCCTCCGAAAAACTGAAGGGTATTGCTGAGGAAAAGAGAATAGAACTCCTGAGATTAATTTTGCATGAAAAAGGAAGTGCAGTTCCCAGAGATTGCAAGGATTTGTTTTGGAAAATGATAAAAGTTTTGCATATATTTTACATGAAGGATGATGGATTTACTTCACATGAGATGTACTCTAGCGTAAACGCAGTGATTAAAGATCCTGTCATCTTTGATGAATTGTTAGAACAAGCTCGACAGAACCTTAGTTCCGTCAAAAAGCCACTAATGCTATGA 2406 0.3932 MSLSRLITPLCCTSSTSDSMVTTSYAKEKMENTSWCRVDLKERIRKMFNKVELSVSSYDTAWVAMIPSPASPHTPLFPECLNWLLGNQLLDGSWGLPDRHPLLMNDALLSTLACILALKQWGVGEDQINRGLQFIESNITSINDEKQHPPLGFEINFPSLIEYAQNLGIKLPIGATSLETMMQNRELEIQRGIQSNSEGWRAYQAYLSEGMLDSQDWKTIMKYQRKNGSLFNSPATTAAAFQRLKNAECLGYLQSVLEKFGNAVPTVYPLDIYARLYMIDSLERLGINHHFKEEIRSVLDDTYRYWVQGVDDIFLDPTTCAMAFRMLRLNGYDVSSDPFYQYSEDKFADSLKGYLKDVGAVIELYRASQAIIHPDESILVRQSLWTKQLLKQESSPYRLYADKLQSYVDLEVKDVLNFPYHANLERLLNRRSMEHYNVEETRILKSSYRSGNFANQEILKLAVEDFNICQLIHIEELKQLSRWVVENRLDKLKFARQKLAYCYFSVAATLFSSELSDARISWAKNGVLTTVVDDFFDVGGSEEELVDLIQLVEKWDVDINTVSCSETVKIIFSAIHSTVCEIGEKSVKWQGRNVKNNVIKIWLNLIQSMYREAEWLRTNTVPTIDDYMENAYISFALGPIVLPALYLVGPKLSDGDAESHELNHLYKLMSTCGRLLNDIRSFKREFEEGKLNALALHIAHGNGVLTAEDASEKLKGIAEEKRIELLRLILHEKGSAVPRDCKDLFWKMIKVLHIFYMKDDGFTSHEMYSSVNAVIKDPVIFDELLEQARQNLSSVKKPLML 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01718 801 Gene3D - 54 257 - -
Spst5g01718 801 FunFam Ent-copalyl diphosphate synthase, chloroplastic 248 466 - -
Spst5g01718 801 CDD Terpene_cyclase_plant_C1 266 778 IPR044814 GO:0010333|GO:0016102
Spst5g01718 801 FunFam Ent-kaur-16-ene synthase, chloroplastic 469 781 - -
Spst5g01718 801 SFLD Terpene Cyclase Like 1 N-term 27 449 - -
Spst5g01718 801 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 226 440 IPR008930 -
Spst5g01718 801 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 37 778 - -
Spst5g01718 801 Gene3D - 46 466 IPR036965 GO:0010333|GO:0016829
Spst5g01718 801 Gene3D Farnesyl Diphosphate Synthase 469 785 IPR008949 -
Spst5g01718 801 SUPERFAMILY Terpenoid synthases 455 779 IPR008949 -
Spst5g01718 801 Pfam Terpene synthase, N-terminal domain 216 396 IPR001906 GO:0010333|GO:0016829
Spst5g01718 801 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 57 247 IPR008930 -
Spst5g01718 801 Pfam Terpene synthase family, metal binding domain 459 722 IPR005630 GO:0000287|GO:0010333|GO:0016829
Spst5g01718 801 FunFam cis-abienol synthase, chloroplastic 54 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01718 Spst-Chr5 52541286 52546553 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g01718 5 52541286 52546553 Spst5g01718 5 52541286 52546553 ECH