Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01849 ATGGCTTCACACCACTCTTTCTTCTTCTCCTTCTTCTTCAGCATTCTCACCCTCACACATTCTTCAACGGAGTACCTCAAGTTGCCGTTACTCCCTACAACCTCACTCTCCAACACCTCCCACATCCTCGCCGCTGATCTCCGCCGCCTGTCCAGCCGCCGCACTTCGCCTCAGTCCCCGCTCACTTCAGGCGCCGCCACGGGCTCCGGGCAGTACTTTGCGGACCTCCGAATCGGATCCCCGCCGCAACGCCTTCTCCTAGTGGTCGACACAGGCAGCGACCTCGTCTGGGTAAAATGCTCCGCCTGCCGGAACTGCTCCACCCACCGTTCCGGATCCGCATTCCTCCCCCGACATTCCATAACCTTCTCCACCCACCACTGCTACGACTCGCAGTGTCGACTCGTTCCTCATCCCACTGCGACACACTGTAACAATCGCACCAAACTTCACACACCATGCCGCTACCAATATTCCTACGCGGACGGGTCCACCACAACGGGCCTCTTCTCCAAGGAAACGACGACGTTCAACACCAGCTCTAACAAACAAGTGAAAATTAAAAACTTCGCCTTCGGGTGCGGGTTTAAAACCTCAGGCCCCAGCGTAACAGGCTCCAGCTTCAACGGCGCGCAGGGCGTAATGGGCCTGGGCCGCGGGCCCATCTCGTTTACTTCCCAACTTGGCCGCAAATTCGGGAACACCTTCTCTTATTGTCTACTTGATTACACCCTATCCCCGCCCCCCAAAAGCTATCTCACCATCGGAGCCTCCTCCAACGATGTCGATTCCCGGAAGCTTTTCAGTTACACGCCATTTGTCACTAACCCTCTCTCTCCCACGTTTTATTACATCACCATCGAGAGTGTCTCCGTCGACGGCGTTAGGTTACCGATAAACCCTTCCGTTTGGGGGATTGACGTCAACGGAAACGGCGGCACTATCGTGGATACTGGCACCACGCTCTCGTTTTTCGCGGAGCCAGCTTACAGGCAGATTTTGGCAGCGGTCCGGCGGCGTGTGAAGCTTCTAGTGGCGAAGGACGCCGCCGCACTCGGGTTCGACCTTTGTGTTAATGTCTCCGGCGCGGCGAGGCCGAAGCTGCCGAAGCTAAGTTTCGTCCTTGCTGGAAAATCGGCGCTGTCGCCGCCGACAGGAAATTATTTCATTGAGCCGGTGGAGGGATTAAAGTGCCTCGCGGTACAGCCGGTTCGACCGGGTTCTGGTTTTTCTGTGATTGGGAATTTGATGCAGCAGGGGTACCTGTTTGAATTCGATTTGGACCGGTCGCGGATGGGATTCTCGCGTCACGGATGTGCGGTTCGCTAA 1329 0.5651 MASHHSFFFSFFFSILTLTHSSTEYLKLPLLPTTSLSNTSHILAADLRRLSSRRTSPQSPLTSGAATGSGQYFADLRIGSPPQRLLLVVDTGSDLVWVKCSACRNCSTHRSGSAFLPRHSITFSTHHCYDSQCRLVPHPTATHCNNRTKLHTPCRYQYSYADGSTTTGLFSKETTTFNTSSNKQVKIKNFAFGCGFKTSGPSVTGSSFNGAQGVMGLGRGPISFTSQLGRKFGNTFSYCLLDYTLSPPPKSYLTIGASSNDVDSRKLFSYTPFVTNPLSPTFYYITIESVSVDGVRLPINPSVWGIDVNGNGGTIVDTGTTLSFFAEPAYRQILAAVRRRVKLLVAKDAAALGFDLCVNVSGAARPKLPKLSFVLAGKSALSPPTGNYFIEPVEGLKCLAVQPVRPGSGFSVIGNLMQQGYLFEFDLDRSRMGFSRHGCAVR 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01849 442 FunFam Aspartyl protease family protein 264 441 - -
Spst2g01849 442 Gene3D Acid Proteases 257 441 IPR021109 -
Spst2g01849 442 PANTHER OS07G0603500 PROTEIN-RELATED 37 439 - -
Spst2g01849 442 ProSiteProfiles Peptidase family A1 domain profile. 72 435 IPR033121 -
Spst2g01849 442 Pfam Xylanase inhibitor C-terminal 283 435 IPR032799 -
Spst2g01849 442 FunFam Aspartyl protease family protein 2 52 256 - -
Spst2g01849 442 SUPERFAMILY Acid proteases 66 439 IPR021109 -
Spst2g01849 442 Pfam Xylanase inhibitor N-terminal 72 256 IPR032861 -
Spst2g01849 442 Gene3D Acid Proteases 46 256 IPR021109 -
Spst2g01849 442 CDD pepsin_A_like_plant 71 439 IPR034161 -
Spst2g01849 442 PRINTS Pepsin (A1) aspartic protease family signature 78 98 IPR001461 GO:0004190|GO:0006508
Spst2g01849 442 PRINTS Pepsin (A1) aspartic protease family signature 314 325 IPR001461 GO:0004190|GO:0006508
Spst2g01849 442 PRINTS Pepsin (A1) aspartic protease family signature 411 426 IPR001461 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01849 Spst-Chr2 17585824 17587152 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01849 48 439 Miscellaneous Gene Families AT1G77480 25.428 1.68e-23 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01849 K22683 - gmx:100812865 607.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01849 2 17585824 17587152 Spst2g01849 2 17585824 17587152 ECH