Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00427 ATGGCGAAAAAAGCAGTGTTGATCGGAATCAACTACCCTGGCACGAAGGCGGAGCTCAAAGGTTGTATAAATGACGTGTTGCGGATGCACCGCTGCCTCGTCGAGCGTTACGGCTTCTCCAAAGACGACATCACCGTTTTGATCGATACCGACAGGTCGTATACGGAACCAACGGGGAAGAACATTCGCTCAGCGTTGACCAGGCTCATACGATCGGCGAAACCGGGGGACATGCTGTTCGTGCACTACAGCGGACACGGTACGCGCTTGCCTGCGGAAACGGGAGAGCATGATGACACTGGATATGATGAATGCATTGTTCCTTCTGATATGAACCTCATCACCGATGATGATTTCAGGGAATTTGTTGACGGGGTCCCCAGAGATTGTAAGCTCACAATAGTATCAGATTCTTGCCATAGTGGTGGCCTAATTGACGGAGCTAAGGAGCAGATAGGAAATAGTACAAAGGGAGAAGGGCAACATTCTGGTTCTGGTTCTGGCTTTGGTTTGTCCAGTTTTCTACTTCGTACTGCGGAGGATGCCATTGAGTCTCGTGGAATTCATATTCCTTCTTCATTACACCGTCATGGACACAAGCATGGGCACAAACATGATGAAGCTGATGATAGAGACATTGAACTTCCACATGCGCAGTATGGCTATGTAAAGAATAGGTCATTGCCACTTTCTACTGTCATAGACATACTAAAGCAGAAAACTGGAAAAAATGATATAGATATTGGCAAATTGAGACTTTCACTTTATGATATTTTTGGGGAAGATGCTAGCCCTAAAGTAAAGAAGTTCATGAAGGTTATATTGAACAAACTTCAACACGGAGATGGTGGAAGTCAAAAACACGGTGGAATCTTGGGGTTGGTGGGTAATCTTGCCCAAGAGTTTCTCAAGCAAAAGTTGGACGCAAACGATAGTGAATATGCAAAACCTGCCATGGAAACAAAAGTAGACAGTAAATATGAAGCATATGCTGGATCAACAAAGCCTCGTATTCCAGACGGTGGAATTCTGTTAAGCGGTTGTCAGACGAATCAGACCTCTGCAGATGCAAGCCCTTCCGGTAATGCTGCCAACGCTTATGGTGCTTTCAGCAATGCAATCCAGGCTATAATTGGAGAGAGTGGCGGTGCAGTCACAAATAAAGAACTTGTTTTAAAGGCAAGAGAAAAGCTGAAGAGAGGAGGTTTCACGCAACGACCAGGACTCTATTGCAGTGATCGCCATGTTGATGGTTCTTTCGTGTGCTCATAA 1272 0.4552 MAKKAVLIGINYPGTKAELKGCINDVLRMHRCLVERYGFSKDDITVLIDTDRSYTEPTGKNIRSALTRLIRSAKPGDMLFVHYSGHGTRLPAETGEHDDTGYDECIVPSDMNLITDDDFREFVDGVPRDCKLTIVSDSCHSGGLIDGAKEQIGNSTKGEGQHSGSGSGFGLSSFLLRTAEDAIESRGIHIPSSLHRHGHKHGHKHDEADDRDIELPHAQYGYVKNRSLPLSTVIDILKQKTGKNDIDIGKLRLSLYDIFGEDASPKVKKFMKVILNKLQHGDGGSQKHGGILGLVGNLAQEFLKQKLDANDSEYAKPAMETKVDSKYEAYAGSTKPRIPDGGILLSGCQTNQTSADASPSGNAANAYGAFSNAIQAIIGESGGAVTNKELVLKAREKLKRGGFTQRPGLYCSDRHVDGSFVCS 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00427 423 MobiDBLite consensus disorder prediction 190 210 - -
Spst11g00427 423 Gene3D - 308 420 - -
Spst11g00427 423 Gene3D - 1 177 - -
Spst11g00427 423 SUPERFAMILY Caspase-like 6 135 IPR029030 -
Spst11g00427 423 Pfam Caspase domain 3 414 IPR011600 GO:0004197|GO:0006508
Spst11g00427 423 PANTHER METACASPASE-4 2 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00427 Spst-Chr11 24965062 24967020 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g00427 11 24965062 24967020 Spst11g00427 11 24965062 24967020 ECH