Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07017 ATGATAGTTAGGTTAGGACTCCTAGTAGCTGCTTCAATCGCAGCCTATACAGTTAAGCAGCTGAATGTGAATAGCTCAAAATCAGAACATGGTGAAGCAAGGTTTAGAAAACATCAAGATGAGGGTAAAGAACAGGAGCATGTCACTTGTTCTACTAAAGGTCTCAACCAGGGGGAAAAGGAAGAGGAAGAGGAAGAGGAAGATGAGGAGGTTAAGTTAATTAGCAGCGTAGTCAATCAAGCTAATGATTTTGAAGATGATATTCTACATGAATTTGAGAGCCTTCTATCTAGGGAGATTGAATTTCCATTCCTTGCTGACAAGATTGATGAGGCAAAGAAAGAGAAAGATAGATTTTATGAAACTGAAATGGCAAAAAGTGCCAGTGAATTAGAACGGTTGCAGAATCTAGTGATGGAGCTGGAGGAGAGGGAAGTGAAACTTGAAGGTGAATTGCTTGAGTACTATGGCTTGAAGGAGCAGGAATCAGACATTTTGGAGTTACAAAGGCAGTTGAACATTAAGACAGTAGAAATAGATATGCTTAATATGACAATTGATTCCCTGCAGGCAGAGAAGAAGAAACTTCAAGAAGAGCTCACACATGGAGCTTCAGTCAAGAGAGAACTCGAGGCAGCCAGAAGCAAGATCAAGGAGCTACAAAGGCAGATACAGCTTGAGGCTAATCAGACAAAAGGCCAGTTGTTGTTGCTTAAACAAAAAGTTTCTGGTCTACAAGCAAAAGAAGAAGAGGCTGTCAAGAAAGAAGCTGAAATTCAAAAGCAATTGAAAGCTGTGAATGACTTGGAGGTTGAAGTTTTGGAGCTTAAGAGAAGAAACAAAGAACTTCAACATGAGAAGCGTGAATTAACTGTTAAGCTTAATGCTGCTGAATCTAAAATTACAGAACTCTCCAATATGACAGAGAATGAAGTGGTTGCCAAGGCAAAAGAGGAGTTCAGTAGGCTGAGGCATACAAACCAAGACCTGCTAAAGCAAGTGGAAGGACTCCAGATGAACAGGTTCAGTGAAGTTGAAGAGCTTGTATACCTTCGTTGGGTCAATGCATGCTTAAGATATGAGCTCAGGAATTACCAGGCACCTCCAGGAAAATTATCAGCCTGTGATCTAAATAAGAGTCTCAGCCCAAAATCACAAGAGAAGGCTAAGCAGCTAATGTTAGAATATGCTGGCTCAGAGCGTGGGCAAGGTGACACAGATCTTGAAAGCTACTTCTCCCATCCCTCTTCACCAAGCAGTGAAGAGTTTGATAACACTTCTTTTGATAGCTCTACTAGCAAATATAGTAATCTTAGCAAGAAAACTAGCTTGATCCAAAAGTTGAAGAAATGGGGTAAAAGCAAAGATGATTCAAGTGTAATTTCATCACCAGCCAGATCTCTTTCAGGAGGCTCTCCTGGCAGGATGAGTATGAGCAATAGGCAGAGGGGTCCACTGGAATACTTGATGCTAAGGAATGCTAGTGATAATATAGCCATCACTACCTTTGGGCAGAAGGATCAGGAACCTACTGATTCTCCTGTAATTCCATCTCTTCCAAACATACGAAAAGTTCCATCCAGTGACTCCCTAAATTCTGTTGCAGCTTCATTCCAGTTGATGTCAAAGTCAGTTGATGGGTCTCTGGATGAAAAATATCCTGCATATAAAGACCGCCATAAATTGGCCGTAGCAAGGGAGAAACAAATTAAGGAAAAGGCTGAGAAAGCAAGAGCACAGAAGTTTGGTGACAATTCAAATTTGAATATGACCAAGGTTGAAAGGGAGAGGCCAATATCTTTGCCACCAAAACTTAGTCAAATAAAGGAGAAGACATATGTTTCTGGTAGTCCAAGTGACCAGTCTGACATTGGTAAGAGTGTTGATAATCAAACCATTAGCAAGATGAAGCTTGTCCACATTGAGAAAAGGCCTCCTAGGGTGCCTCGGCCACCTCCTAAACCATCTGATGGTGCTCATGTTAGTACAAATTCAAATACTTGCAATGGAGTACCGCATGCTTCCCCTGTGCCTCCTCCACCCCCACCACCACCACCACCACCAGGTGGACCACCTCCCCCTACCCCAGGAAATCTACCAATAGGAACAGTGGGTGGTGACAAAGTGCACAGGGCTCCTGAGCTAGTTGAATTTTATCAAACATTGATGAAACGGGAGGCAAAGAAGGATACTTCATCTTTAATTTCTTCAGCAACTAATGCATCTGATGCCAGGAGCAACATGATTGGGGAAATTGAGAATAGATCATCATTCCTCTTAACTGTGAAAGCTGATGTAGAAACACAAGGTGATTTTGTCATGTCCTTGGCAACTGAAGTTCGAGCAGCCTCATTCTCTAAGATTGAAGATCTAGTGGCCTTTGTGAATTGGCTAGATGAGGAACTTTCCTTCCTAGTTGATGAACGAGCTGTTCTCAAGCACTTTGATTGGCCTGAAGGGAAAGCAGATGCACTGAGGGAGGCGGCTTTTGAATATCAGGATCTGATGAAATTGGAAAAGCAAGTCTCCACCTTCACTGATGATCCCAAACTCCCATGTGAAGCTGCTTTGCAGAAAATGTACTCGTTGCTTGAAAAAGTGGAGCAAAGTGTATATGCACTCTTACGGACAAGAGATATGGCTATTTCACGGTACAAGGAGTTTGGAATACCAGTAGATTGGCTATTAGATTCAGGAGTTGTAGGCAAGATCAAGCTTTCTTCTGTGCAACTGGCAAAGAAGTATATAAAACGTGTCACATCTGAACTTGATATGTTATCTGGACCTGAGAAGGAACCCACAAGAGAGTTTTTTACTCTGCAAGGCGTCCGTTTTGCTTTCCGTGTTCATCAGTTTGCAGGAGGATTTGATGCAGAGAGCATGAAGGCTTTTGAACAACTAAGAAGCCACATCCATGCTCAAGCAGGTGAAGATAATAAACCAGAAATGTAG 2952 0.4217 MIVRLGLLVAASIAAYTVKQLNVNSSKSEHGEARFRKHQDEGKEQEHVTCSTKGLNQGEKEEEEEEEDEEVKLISSVVNQANDFEDDILHEFESLLSREIEFPFLADKIDEAKKEKDRFYETEMAKSASELERLQNLVMELEEREVKLEGELLEYYGLKEQESDILELQRQLNIKTVEIDMLNMTIDSLQAEKKKLQEELTHGASVKRELEAARSKIKELQRQIQLEANQTKGQLLLLKQKVSGLQAKEEEAVKKEAEIQKQLKAVNDLEVEVLELKRRNKELQHEKRELTVKLNAAESKITELSNMTENEVVAKAKEEFSRLRHTNQDLLKQVEGLQMNRFSEVEELVYLRWVNACLRYELRNYQAPPGKLSACDLNKSLSPKSQEKAKQLMLEYAGSERGQGDTDLESYFSHPSSPSSEEFDNTSFDSSTSKYSNLSKKTSLIQKLKKWGKSKDDSSVISSPARSLSGGSPGRMSMSNRQRGPLEYLMLRNASDNIAITTFGQKDQEPTDSPVIPSLPNIRKVPSSDSLNSVAASFQLMSKSVDGSLDEKYPAYKDRHKLAVAREKQIKEKAEKARAQKFGDNSNLNMTKVERERPISLPPKLSQIKEKTYVSGSPSDQSDIGKSVDNQTISKMKLVHIEKRPPRVPRPPPKPSDGAHVSTNSNTCNGVPHASPVPPPPPPPPPPPGGPPPPTPGNLPIGTVGGDKVHRAPELVEFYQTLMKREAKKDTSSLISSATNASDARSNMIGEIENRSSFLLTVKADVETQGDFVMSLATEVRAASFSKIEDLVAFVNWLDEELSFLVDERAVLKHFDWPEGKADALREAAFEYQDLMKLEKQVSTFTDDPKLPCEAALQKMYSLLEKVEQSVYALLRTRDMAISRYKEFGIPVDWLLDSGVVGKIKLSSVQLAKKYIKRVTSELDMLSGPEKEPTREFFTLQGVRFAFRVHQFAGGFDAESMKAFEQLRSHIHAQAGEDNKPEM. 984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07017 983 MobiDBLite consensus disorder prediction 27 69 - -
Seca8g07017 983 MobiDBLite consensus disorder prediction 29 48 - -
Seca8g07017 983 MobiDBLite consensus disorder prediction 673 699 - -
Seca8g07017 983 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 424 972 IPR040265 -
Seca8g07017 983 Coils Coil 124 151 - -
Seca8g07017 983 MobiDBLite consensus disorder prediction 636 650 - -
Seca8g07017 983 MobiDBLite consensus disorder prediction 572 707 - -
Seca8g07017 983 SUPERFAMILY Formin homology 2 domain (FH2 domain) 678 862 - -
Seca8g07017 983 MobiDBLite consensus disorder prediction 457 479 - -
Seca8g07017 983 MobiDBLite consensus disorder prediction 409 435 - -
Seca8g07017 983 Coils Coil 203 230 - -
Seca8g07017 983 Coils Coil 158 199 - -
Seca8g07017 983 MobiDBLite consensus disorder prediction 455 480 - -
Seca8g07017 983 MobiDBLite consensus disorder prediction 658 672 - -
Seca8g07017 983 Coils Coil 245 307 - -
Seca8g07017 983 Coils Coil 313 333 - -
Seca8g07017 983 MobiDBLite consensus disorder prediction 610 634 - -
Seca8g07017 983 MobiDBLite consensus disorder prediction 400 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07017 Seca-Chr8 165807639 165814008 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07017 - - gmx:100802696 1392.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07017 8 165807639 165814008 Seca8g07017 8 165807639 165814008 ECH