Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03541 ATGAAGAAATGGACCTATGTCCATTATATAAGGGCTCATACACATGATGTTAGGGCCTTAACTGTTACTGTACCGATAAGTCAAGAAGATACTTTGCCAGATGAGAGGATCAAAAGAGCTCGACGTAAAGAAAAGCCCGTTGAGTTTAGTTACCATAAGTGGGCTCATATGGGGGTTCCCATGCTTATCTCAGCAGGAGATGACACAAAACTCTTTGCATACCCTGTGAAAGAATTCACGAAGTTTTCTCCTCATGATATCTGTCTTGCACCTCAGAGAACACCTATTCAACTAGTTCTTAATATTGCCTTCAATCAATCATCAATGCTTTTAGTTCAGTCTTCGCATTGGATAGATGTTCATTTTCTACAACTAAAAAATGTTCACACAGCTAGAGGCTTTGCAAAGACTGAAATACTTGCCCGAGTCAAGAGCAAGGCATCTCGTAAGATAATTTGCAGCACTATTGCTAATTCAGGGGTGCTTTTTTCATACTCTGATCATGTGAAGCCTAGTCTTTTTGAATTAAAGAGGTGTGAAGTTGGAAAAATGACATGGAGTGTTAATAGAAGGAAACTTCCTCAGAGATTACCATTTGCCCATTCTATGATTTTTACTCAAGACTCCTCTTGGTTGATAGTAGCTAGGAATGATAGAAGGATATATGTTGTGGATGTCACTCAGAACTAG 690 0.3899 MKKWTYVHYIRAHTHDVRALTVTVPISQEDTLPDERIKRARRKEKPVEFSYHKWAHMGVPMLISAGDDTKLFAYPVKEFTKFSPHDICLAPQRTPIQLVLNIAFNQSSMLLVQSSHWIDVHFLQLKNVHTARGFAKTEILARVKSKASRKIICSTIANSGVLFSYSDHVKPSLFELKRCEVGKMTWSVNRRKLPQRLPFAHSMIFTQDSSWLIVARNDRRIYVVDVTQN. 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03541 229 PANTHER WD REPEAT-CONTAINING PROTEIN PCN 1 228 IPR044622 GO:0010073|GO:0035266
Seca8g03541 229 SUPERFAMILY WD40 repeat-like 3 227 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03541 Seca-Chr8 101986597 101993444 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03541 K14548 - gmx:100776641 342.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g03541 8 101986597 101993444 Seca8g03541 8 101986597 101993444 ECH