Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03495 ATGGACATTGCTGCTCTTTTAACTTCTGCTGGAATTAATATTGCTGTGTGTGTGGTGCTCTTTTCAATTTATTCTGTATTAAGAAAACAGCCCAGCAATGTTAGTGTGTACTTTGGGCGGAGATTAGCTTCTCAGCATTCAAGACGCCTTGATTTCTGCCTGGAAAGATTTGTTCCCTCCCCTAGCTGGATATTGAAAGCATGGCAAACGACTGAGGATGAGATATTGGCTATTGGTGGCTTGGATGCTGTGGTTTTTGTAAGGATACTTGTGTTCAGTATTCGAGCATTTTCCATTGCTGCTGTCATCTGCACTATTCTTGTGCTTCCTGTGAATTACCATGGTAGGGAAAGAATGCATAAGAATATACCTTTGGAGTCACTGGATGTATTTACCATTGAGAATGTCAAAGAAGGTTCAAGGTGGCTTTGGGCTCACTGTCTCGCATTATACGTCATAACATTTGCAGCTTGTACTCTTCTTTACTTTGAATATAAAAGCATTACTAATTTGAGACTTCTACATATAATTGGATCGCCTCCAAATCCAAGTCATTTTACTATTCTTGTCCGATCGATTCCCTGGTCTTCAGAAGAATCATATTGTGAGACAGTGGAAAAATTCTTCTCATATTATCATGCATCCACATATTTGTCACACCAAATGATTTATAAATCTGGTTCAGTTCAGAAACTGAAGGATGATGCTGAGCATATGTGCAAGGTAATTAGAGACGTTTCATTGGAAAAGACTAAGACTTGTAAGCCAAATTTTATCCAATGTTGTTGTTCTGGAACACCCACAAATTCTTTTAAGATGATTTCTAAGAAGATGGATAGTATACATGGGAGAACGAGCTACAATGACATGCATCTAGATATAAAAAGAAAGATTTGTGCTTTCAAGTTTGGATCTCTGATACAGGAATGTGCAGCTGCTTTTGTGTTCTTTAAAAGTCGGTATGCGGCCCTTATGGCTGCACAGATTCTGCAAACATCAAATCCTATGTTATGGGCAACAGACATAGCTCCTGAACCACATGATGTTTACTGGTCCAATATTTGCATACCATATAGGCAACTTTGGATCCGTAAGATAGCTACCCTTGTGGCTTCTGTTGCCTTCATGCTTGTGTTCCTTATCCCTGTTACATTTGTACAAGGCTTGACTCAACTAGACAAGCTTCAGAAAACGTTCCCTTTTTTGGCAGGGATACTTAAAAAGAAATTTGTGAATCAGGTGGTGATTGGTTACCTTCCAAGTGTGATATTGGTTTTATTTATGTGTGCAGTTCCACCAATGATGATGCTATTTGCAGCAGTCGAGGGTTCTATTTCCCGTAGTGGAAGGAAGAAGAGTGCATGTGTTAAAGTCTTGTACTTTACAATCTGGAATGTGTTTTTTGTAAATGTTTTTACTGGTTCCGTTATCAGTCAACTCTCAGTCTTTACTAGTGTAGCAGATCTGCCTGCCCAACTTGCCAAGGCAGTGCCAGCACAGGCTACCTTCTTCACAACTTATGTTCTATCATCTGGTTGGGCAAGTTTGGCATGTGAAGTTATGCAAATTTTTCCTCTAGTATGCAATGTATTCCAGAAATTCATACTCAGGTTTAAGGATGATGCACTTAATGGCAGCCTATCGTTTCCATACCATACAGAAGTTCCAAGGACTTTACTGTTTGGATTCCTTGGGTTCACCTGTTCTATTCTGGCACCCCTAATGTTGCCCTTCTTATTGATATACTTTTTCCTTGCTTACCTTGTTTACCGAAATCAGGTTAGTACTTTTATTCTTTTTTTTATCTTCTCTTTTCCTCATTATGGAGTACATTGTGCTTAA 1842 0.3903 MDIAALLTSAGINIAVCVVLFSIYSVLRKQPSNVSVYFGRRLASQHSRRLDFCLERFVPSPSWILKAWQTTEDEILAIGGLDAVVFVRILVFSIRAFSIAAVICTILVLPVNYHGRERMHKNIPLESLDVFTIENVKEGSRWLWAHCLALYVITFAACTLLYFEYKSITNLRLLHIIGSPPNPSHFTILVRSIPWSSEESYCETVEKFFSYYHASTYLSHQMIYKSGSVQKLKDDAEHMCKVIRDVSLEKTKTCKPNFIQCCCSGTPTNSFKMISKKMDSIHGRTSYNDMHLDIKRKICAFKFGSLIQECAAAFVFFKSRYAALMAAQILQTSNPMLWATDIAPEPHDVYWSNICIPYRQLWIRKIATLVASVAFMLVFLIPVTFVQGLTQLDKLQKTFPFLAGILKKKFVNQVVIGYLPSVILVLFMCAVPPMMMLFAAVEGSISRSGRKKSACVKVLYFTIWNVFFVNVFTGSVISQLSVFTSVADLPAQLAKAVPAQATFFTTYVLSSGWASLACEVMQIFPLVCNVFQKFILRFKDDALNGSLSFPYHTEVPRTLLFGFLGFTCSILAPLMLPFLLIYFFLAYLVYRNQVSTFILFFIFSFPHYGVHCA. 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03495 613 Pfam Late exocytosis, associated with Golgi transport 6 164 IPR032880 -
Seca8g03495 613 PANTHER PROBABLE MEMBRANE PROTEIN DUF221-RELATED 5 594 IPR045122 GO:0005227
Seca8g03495 613 Pfam Cytosolic domain of 10TM putative phosphate transporter 185 353 IPR027815 -
Seca8g03495 613 Pfam Calcium-dependent channel, 7TM region, putative phosphate 364 594 IPR003864 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03495 Seca-Chr8 100488062 100501645 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03495 K21989 - gmx:100796574 1034.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g03495 8 100488062 100501645 Seca8g03495 8 100488062 100501645 ECH
Seca4g01306 4 20653146 20674603 Seca8g03495 8 100488062 100501645 PCT