Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03468 ATGCAATCGAGGGTTGTGGCCCTTGAAGAAGGAAAGGAAAGAACCAACCAATCCAAAGGCTTGCCTCTAGGATCACTGCGGCTACTTGTCCTGTTTCTTTCTCTATGTGTTGTGATTTCGGTTATCAGCATATACACCATTAAGCATTTTGGAATTGAGAGTGTGGTCACCACAGTGAGCTCGAGTTTTCAGCCATGTTATGAGGAACCTGGTGGTTTGGAGAAATGGATTAGTCCTCCTTCTAACCTGATCCACAATATGAGTGACAAAGAACTGCTTTGGAGAGCTTCTTTTGTTCCTCGGATTAAGAATTACCCTTTTCCAAGAGTTCCCAAGATTGCATTCATGTTCCTCACCAAAGGACCATTACCTCTTGCACCCCTTTGGGAGAGGTTTCTGAAGGGGCATGAGAGGCTTTATTCCATATATATTCATTCACTGCCTTCATTTCAAGCTCAGTTTCCTCCTTCATCTGTCTTTTACAAGAGGCAAATCCCTAGCCAGGTTTCTGAATGGGGAAGGATGAGCATGTGTGATGCTGAAAGAAGACTACTTGCTAATGCACTGCTAGATATCTCCAACGAGTGGTTTATTCTGCTGTCTGAATCATGCATCCCTCTCTATAAGTTTACTTTCATCTACAACTATATAATGAAATCCAAATACAGCTTCATTGGTGCATTTGATGATCCTGGTCCATACGGAAGAGGACGCTACAATGAAAACATGGCTCCTCTGGTGAACATTACAAAGTGGAGAAAAGGCTCTCAATGGTTTGAAATAAACCGAAAGCTCGCCATCAACATTGTTGAAGACACAACATTTTATCCAAAGTTTGAACAATATTGTAGACCAGCTTGTTATGTGGATGAACACTATTTCCCCACCATGCTAACCATTCAAGCAGGGAATGCCTTGGCAAATAGGAGCATAACTTGGGTGGACTGGTCTAGGGGTGGAGCTCACCCAGCTACATTTGGAAGAACAGATATCACAGAGGAGTTTTTCAATAGAGTTCGTGGAGGTCACAAATGCCTATACAACAACAGAAACTCTTCAGCTTGTTTTCTTTTTGCCAGAAAATTTGCTCCTAGTGCTTTGGAACCTTTGTTACATATGGTGGATTCAAAGGTCTTGGACTTCTGA 1146 0.4232 MQSRVVALEEGKERTNQSKGLPLGSLRLLVLFLSLCVVISVISIYTIKHFGIESVVTTVSSSFQPCYEEPGGLEKWISPPSNLIHNMSDKELLWRASFVPRIKNYPFPRVPKIAFMFLTKGPLPLAPLWERFLKGHERLYSIYIHSLPSFQAQFPPSSVFYKRQIPSQVSEWGRMSMCDAERRLLANALLDISNEWFILLSESCIPLYKFTFIYNYIMKSKYSFIGAFDDPGPYGRGRYNENMAPLVNITKWRKGSQWFEINRKLAINIVEDTTFYPKFEQYCRPACYVDEHYFPTMLTIQAGNALANRSITWVDWSRGGAHPATFGRTDITEEFFNRVRGGHKCLYNNRNSSACFLFARKFAPSALEPLLHMVDSKVLDF. 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03468 381 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 41 371 IPR044174 GO:0016757
Seca8g03468 381 Pfam Core-2/I-Branching enzyme 113 339 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03468 Seca-Chr8 99455049 99459537 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03468 - - gmx:100785919 686.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g03468 8 99455049 99459537 Seca8g03468 8 99455049 99459537 ECH