Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09612 ATGGCGAAAAAGGCGGTGCTAATTGGGATCAACTATCCTGGAACGAAGGCGGAGCTGAGAGGATGCATAAACGACGTCTGGAGGATGCACAAATGCTTGATCGAGCGATACGGTTTCTCGGAGGACGACATCACCGTTTTGATCGACACCGATCATTCCTACACGGAGCCAACCGGTAAGAATATACGCCGGGCGCTGGCTGGATTGGTCCGATCGGCGGAGCCAGGCGACGTGCTGTTCGTCCATTACAGCGGCCACGGCACCCGTCTTCCCGCCGAAACCGGAGAGGACGATGACACTGGCTATGATGAATGCATCGTTCCTTCTGATATGAACCTCATCACCGATGATGATTTCAAGGAATTTGTAGACGGGGTGCCAAGAGGTTGTAAGCTCACGATTATATCAGATTCTTGCCACAGTGGTGGCCTAATTGAAGAGGCAAAGGAGCAGATAGGAGAGAGCACAAAAGGAGAAGAGCAACACTCTAGTTCTGGCTTTGGATTGTCGAGCTTTCTACATCGGACTGTGGAAGATGCCATCGAGAGTCGTGGATTTCATATCCCTTCAGCATTGCGCCATCATGGACGCAGGGATGATGATGAAGTTGAGGATAGGGATATTGAACTTCCACATGGGAACTATGGTTATGTAAAGAATAGGTCTCTGCCCCTGTCAACCCTCATTGATATACTCAAGCAGAAAACTGGGAAAGATGATATAGATGTTGGAAAAATAAGACCTACCCTCTTCGATGTTTTTGGTGAGGATGCTAGCCCTAAAGTAAAGAAGTTCATGAAGGTTATCTTGGACAAACTCCAACATGGAGGTGGTGAAGGTGGAGGACAGCATGGTGGGATATTGGGGTTGGTGGGTAGTCTTGCCCAAGAGTTTCTCAAGCAAAAGCTGGATCAGAATGATGAGGGATACGCTAAGCCAGCCATGGAAACACATGTTGGAAGTAAGGATGAGGCATATGCTGGATCAAACAAGCGTGGTCTTCCAGATGGTGGAATTCTGCTGAGTGGCTGTCAGACAGACCAGACTTCAGCAGATGCAAGTCCTTCTGGAAATTCTGGGGGTGCTTATGGAGCTTTCAGCAATGCAATTCAGGCAATAATTGAGGAGAGTGATGGTGCAGTTACAAATTCAGAGCTTGTTACCAAGGCCAGAGAGAAGCTAAAGAGGGAGGGTTTCACTCAACGACCTGGACTGTATTGCAGTGACCACCATGTTGATGGTCCTTTCGTGTGCTAA 1257 0.4845 MAKKAVLIGINYPGTKAELRGCINDVWRMHKCLIERYGFSEDDITVLIDTDHSYTEPTGKNIRRALAGLVRSAEPGDVLFVHYSGHGTRLPAETGEDDDTGYDECIVPSDMNLITDDDFKEFVDGVPRGCKLTIISDSCHSGGLIEEAKEQIGESTKGEEQHSSSGFGLSSFLHRTVEDAIESRGFHIPSALRHHGRRDDDEVEDRDIELPHGNYGYVKNRSLPLSTLIDILKQKTGKDDIDVGKIRPTLFDVFGEDASPKVKKFMKVILDKLQHGGGEGGGQHGGILGLVGSLAQEFLKQKLDQNDEGYAKPAMETHVGSKDEAYAGSNKRGLPDGGILLSGCQTDQTSADASPSGNSGGAYGAFSNAIQAIIEESDGAVTNSELVTKAREKLKREGFTQRPGLYCSDHHVDGPFVC. 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09612 418 PANTHER METACASPASE-4 2 411 - -
Seca4g09612 418 SUPERFAMILY Caspase-like 6 135 IPR029030 -
Seca4g09612 418 MobiDBLite consensus disorder prediction 338 358 - -
Seca4g09612 418 Pfam Caspase domain 3 409 IPR011600 GO:0004197|GO:0006508
Seca4g09612 418 Gene3D - 1 176 - -
Seca4g09612 418 Gene3D - 305 416 - -
Seca4g09612 418 MobiDBLite consensus disorder prediction 342 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09612 Seca-Chr4 226578460 226580828 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09612 - - gmx:100802658 711.835
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g09612 4 226578460 226580828 Seca4g09612 4 226578460 226580828 ECH