Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06886 ATGAAGTACGTGTTGGTGACAGGTGGTGTTGTCAGTGGACTTGGCAAAGGAGTCACTGCCAGCAGTATTGGACTCCTCCTCAAGGCCTGTGGTCTTCGAGTTACTTCTATCAAGATTGATCCCTACCTGAACACTGATGCAGGAACAATGTCTCCTTTTGAGCATGGGGAGGTGTTTGTCTTAGATGATGGCGGTGAGGTTGACCTTGATCTTGGAAACTATGAACGTTTCTTGGACATCAAGTTAACACGCGACAATAATATCACTACTGGAAAAATATATCAGGCTGTTATTGAGAAGGAGAGAAGAGGAGATTATCTTGGAAAGACTGTCCAGGTTGTTCCACACATAACAGATGGCATCCAAGAGTGGATAGAGCGTGTAGCCAAGATACCAGTTGATGGAAAAGAAGGGCCAGCTGATGTTTGTGTCATTGAATTAGGTGGAACTATAGGGGATATTGAGTCTATGCCTTTCATTGAAGCACTTGGCCAATTTTCATACCGTGTAGGCCCTGGCAACTTCTGTTTGGTTCACGTCAGCCTGGTTCCTGTTCTCAATGTTGTTGGTGAACCGAAAACAAAGCCAACTCAGCACAGTGTTCGTCAACTTAGAGGATTAGGTTTGGTCCCTAATCTTCTTGCTTGTCGCAGTTCAAAGGAACTTGATGACAATGTTAAGGCAAAACTTTCTCAATTTTGTCATGTGCCGTTGTCAAACGTACTAACTCTCCATGATGTTCCAAATATTTGGCACATTCCTTTGCTCATGAGAGACCAGAAGGCGCATGAGGCGATCCTGAAAGCATTAAACCTGCTAGGTGTTGCTAAAGAGCCTAATTTGAAAGAGTGGATCACTAGGACAAAAGTTTGTGACAAAATTCATGAAACAGTTAGAATTGCGATGGTAGGAAAATACACTGGCCTTTCAGATGCATATCTTTCTGTTCTGAAGGCACTTTTGCATGCTTCTGTTGCTCGCAACCGTAAGCTTATTGTGGACTGGGTTCCAGCTGGGGATCTTGAAGAAGCTACTTACAAAGAGGTGGAGCTTTCTACAGTACTACATGATCCTGCCGCATATAAAGCTGCTTGGAGTCTTTTGAAGGGTGCTAATGGTGTTCTAGTTCCAGGAGGTTTTGGTGATAGAGGAGTGCAAGGGAAAATTCTCGCTGCTAAGTATGCTAGAGAATCCAATGTTCCATTTCTGGGCATTTGCTTGGGGATGCAAATTGCTGTCATTGAATATGCACGATCTGTTCTGGGTCTGCATGATGCTACTAGCACAGAATTCAATCCTGAAACCGAGAACCCTGTTGTCATATTTATGCCAGAAGGTTCAAAGACACACATGGGGGCAACTATGCGTCTTGGCTCAAGGAGAACTTACTTTCATGTTGCTGACTGTAAATCTGCAAAATTGTATGGTAATGTAAGCTTTATTGATGAGCGGCACCGGCATAGATACGAGGTTAATCCTGACATGATATCACAGCTAGAGAGTGCTGGTCTATCTTTTGTTGGCAAAGATGAAACAGGGAGGCGCATGGAGATAGTTGAACTGCCTAGCCATCCTTATTTTATTGGCGTTCAGTTTCACCCTGAGTTCAAGTCCAGACCAGGGAAACCTTCTCCACTCTTCTCAGGACTAATAGCAGCAGCATGTGAACCAAGGAGGACAGTTATGTCAAATAATGGGCACACCAAGTTAACAAATGGAATATACAATGGACACTCAACAAAACTGAAAGCACACCAAAATGGAAATGGCTTCATATCATCCAATGGTAGCTTAAATGGTGTATATACCAATGGCAATGGGGTGTATGTTGAAGGTAGTTGTTAG 1845 0.4341 MKYVLVTGGVVSGLGKGVTASSIGLLLKACGLRVTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDIKLTRDNNITTGKIYQAVIEKERRGDYLGKTVQVVPHITDGIQEWIERVAKIPVDGKEGPADVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLVHVSLVPVLNVVGEPKTKPTQHSVRQLRGLGLVPNLLACRSSKELDDNVKAKLSQFCHVPLSNVLTLHDVPNIWHIPLLMRDQKAHEAILKALNLLGVAKEPNLKEWITRTKVCDKIHETVRIAMVGKYTGLSDAYLSVLKALLHASVARNRKLIVDWVPAGDLEEATYKEVELSTVLHDPAAYKAAWSLLKGANGVLVPGGFGDRGVQGKILAAKYARESNVPFLGICLGMQIAVIEYARSVLGLHDATSTEFNPETENPVVIFMPEGSKTHMGATMRLGSRRTYFHVADCKSAKLYGNVSFIDERHRHRYEVNPDMISQLESAGLSFVGKDETGRRMEIVELPSHPYFIGVQFHPEFKSRPGKPSPLFSGLIAAACEPRRTVMSNNGHTKLTNGIYNGHSTKLKAHQNGNGFISSNGSLNGVYTNGNGVYVEGSC. 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06886 614 Pfam Glutamine amidotransferase class-I 309 552 IPR017926 -
Seca4g06886 614 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 299 560 - -
Seca4g06886 614 Gene3D - 1 294 IPR027417 -
Seca4g06886 614 Pfam CTP synthase N-terminus 2 272 IPR017456 GO:0003883|GO:0006221
Seca4g06886 614 Hamap CTP synthase [pyrG]. 1 558 IPR004468 GO:0003883|GO:0006221
Seca4g06886 614 Gene3D - 295 568 IPR029062 -
Seca4g06886 614 CDD GATase1_CTP_Synthase 298 551 IPR033828 GO:0003883|GO:0006241
Seca4g06886 614 FunFam CTP synthase 1 292 - -
Seca4g06886 614 SUPERFAMILY Class I glutamine amidotransferase-like 297 558 IPR029062 -
Seca4g06886 614 NCBIfam CTP synthase (glutamine hydrolyzing) 1 553 IPR004468 GO:0003883|GO:0006221
Seca4g06886 614 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 272 IPR027417 -
Seca4g06886 614 CDD CTPS_N 2 268 IPR017456 GO:0003883|GO:0006221
Seca4g06886 614 PANTHER CTP SYNTHASE 1 562 IPR004468 GO:0003883|GO:0006221
Seca4g06886 614 FunFam CTP synthase 295 568 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06886 Seca-Chr4 144825002 144831503 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g06886 4 144825002 144831503 Seca4g06886 4 144825002 144831503 ECH