Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01307 ATGAAGGAGGACGCAGCAGACAAAGAGAAAGGCGAAGGCGCGAAGCTTTGGGGAGTTTTCCTCTTCGGTCTGATTGGCGCCACCGCCACTACCTATGCTGTCGGTCAGCTTCGGAGGACTGTTGATTGGTTCTATACTCAGCTGTCCAGGTCGCAGTCATCATGGAAAGGAGGGAGTGGTGGTTCTTTCCGATCATCTTTTCAGGAAGAGGCATGGAGGAGGCACAATAAGCGATTGCAAGAGGAGTATGAGGAGGAGATGGAGAGAGTGGAACGAATACGGCGTATGCAAAGTGTGTTCAACAGAGAAAGAAATAAATTCAAAAGAAGTTACGAAAGCTGGAGGGAAAATGGTCCTGGTGCATATCACCAACATTTTCAGAGAGAAGATTGGTATTGGAAGACTGATACATCCTTTAGAGACCGGAGGACTAATTATCGAGAAACTCCGAGAGAGAGTGGCAACTATGCATTATCACATCACTACTCAATTTTGGGCCTTGACAGGTTTAGAAAAATGCCATATTCAGATGCTGAGATTAAGTCAGCATTTCGTACCAAGGCAAAGGAGTATCATCCTGATCAGAACCAGGACAATAAAGTGGCTGCTGAGGCTAAGTTCAAAGAAGTGATGTCTTCATACGAGGCCATAAAACAGGAAAGAAGGAACCAGAATCTGTAA 681 0.4552 MKEDAADKEKGEGAKLWGVFLFGLIGATATTYAVGQLRRTVDWFYTQLSRSQSSWKGGSGGSFRSSFQEEAWRRHNKRLQEEYEEEMERVERIRRMQSVFNRERNKFKRSYESWRENGPGAYHQHFQREDWYWKTDTSFRDRRTNYRETPRESGNYALSHHYSILGLDRFRKMPYSDAEIKSAFRTKAKEYHPDQNQDNKVAAEAKFKEVMSSYEAIKQERRNQNL. 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01307 226 CDD DnaJ 161 215 IPR001623 -
Seca4g01307 226 Gene3D DnaJ domain 153 226 IPR036869 -
Seca4g01307 226 SMART dnaj_3 159 222 IPR001623 -
Seca4g01307 226 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 6 224 - -
Seca4g01307 226 ProSiteProfiles dnaJ domain profile. 160 222 IPR001623 -
Seca4g01307 226 PRINTS DnaJ domain signature 184 199 IPR001623 -
Seca4g01307 226 PRINTS DnaJ domain signature 202 222 IPR001623 -
Seca4g01307 226 SUPERFAMILY Chaperone J-domain 159 223 IPR036869 -
Seca4g01307 226 Coils Coil 69 96 - -
Seca4g01307 226 Pfam DnaJ domain 161 222 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01307 Seca-Chr4 20738828 20742997 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01307 - - gmx:100812371 368.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01307 4 20738828 20742997 Seca4g01307 4 20738828 20742997 ECH
Seca4g01307 4 20738828 20742997 Seca4g01307 4 20738828 20742997 PCT