Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01288 ATGAAGAGAGGGAAGGATGATGAGAAGGTGATGGGGCCAATGTTCCCTAGACTCCATGTCAGTGATACAGAGAAGGGAGGGCCAAGAGCACCACCTAGGAATAAGATGGCCCTCTATGAGCAGTTTAGTATTCCCTCTCAAAGGTTCAACTCAGGCCTTCTGCCACTCCACCCAAACACTTCTAGTAATACAGCTCCCCCAGCATCCTCAAGCCAGGGGACTGTCCCTGAAAGAAATTATGTCTTCCCCGTTCATTTACCTCCTCAAACACCTACTCGGCGAGCTGAAAAACATATTTCTCGCCAATCGGGAGGAGGGGCAAATCTGAATGCTTCATTGGTGCAACTTGAACAGAGGAAGAAGGTAGATGAAGATGACTTTATGGTTCCTGTATACATTCGTTCAGGGACTGGTCAATCTAATGATAAAAGTCTTGAGAGTTTCGATGGGAAAAAACTCACTTCCACAGGCTCTAGGTATTTTGGTTGTTCAGTAACAGGGCAAAATGATTGTGAAAGGGATCCAAAACAGAATGGCTCTCCACTTGTCAATACGAGAAAAGATGTGAGAAGTGAGACTGATGGTCTTCCACAAGTAAATCCCAATAAGGAGCAGATATTAATGTCTGCCAGAAACATATCAACTGGAGAAAATATTCAGACCTTAGTAAGGAAAGCCAAGTTGACTTCAAATCAAGAGTTTCAAAATTATGCTGTGTCCAAACTTAGCAGATTGCGTCAAGGCGATGCATGCTTACGGAGGGACTGTGGAATTGGGTCACAATCAAATGGCATTGAACAAAGTGATGGTCTTGTTGAGTCTACAATGGAGACAGACAAGAGAAATGCTCCTGCAGAAAACCAAACCAGTCAAGCTGAGGCAATCATTGACACTGAATATCATGATACCAGGACTGGCAGTCCAATACAGAGAGGAAGTTTAAACAAAAGTGACAATGTTTCCAAGATCTCCAGGGTAGAAAATTTGTCAACCCTGAAAATTTCTCCTGATGATGTTGTTGGACTAATAGGTCAAAAACATTTCTGGAAAGCCAGAAGAGCAATTGCCAATCAACAGAGAGTGTTTGCAGTCCAAGTGTTTGAGTTGCATAGACTAATAAAGGTCCAACAGCTGATTGCTGGATCACCAGATCTTTTGCTTGAAGATGCTGCTTTTCTTGGAAGGTCTCCTACGAAGGGATCTACTCCCAAAAAACTCTCACTGGAATATGTTGTAAAACCTCGGCAACAAAATCTTAAGCGCAAAGATGATTCTGAAAAGCTAAATCATAAAATGGAATGTTCAGCAGAGAATGCAGTTGGTAAACATCTCTGTCATCGATGA 1344 0.4256 MKRGKDDEKVMGPMFPRLHVSDTEKGGPRAPPRNKMALYEQFSIPSQRFNSGLLPLHPNTSSNTAPPASSSQGTVPERNYVFPVHLPPQTPTRRAEKHISRQSGGGANLNASLVQLEQRKKVDEDDFMVPVYIRSGTGQSNDKSLESFDGKKLTSTGSRYFGCSVTGQNDCERDPKQNGSPLVNTRKDVRSETDGLPQVNPNKEQILMSARNISTGENIQTLVRKAKLTSNQEFQNYAVSKLSRLRQGDACLRRDCGIGSQSNGIEQSDGLVESTMETDKRNAPAENQTSQAEAIIDTEYHDTRTGSPIQRGSLNKSDNVSKISRVENLSTLKISPDDVVGLIGQKHFWKARRAIANQQRVFAVQVFELHRLIKVQQLIAGSPDLLLEDAAFLGRSPTKGSTPKKLSLEYVVKPRQQNLKRKDDSEKLNHKMECSAENAVGKHLCHR. 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01288 447 MobiDBLite consensus disorder prediction 49 75 - -
Seca4g01288 447 MobiDBLite consensus disorder prediction 172 197 - -
Seca4g01288 447 MobiDBLite consensus disorder prediction 172 186 - -
Seca4g01288 447 MobiDBLite consensus disorder prediction 1 33 - -
Seca4g01288 447 PANTHER PROTEIN EARLY FLOWERING 3 1 442 IPR039319 GO:2000028
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01288 Seca-Chr4 20305385 20310949 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01288 K12125 - gmx:100793561 671.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01288 4 20305385 20310949 Seca4g01288 4 20305385 20310949 ECH