Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01287 ATGGGAAAATTAAAGGTTGCAATCGTGTTGTTCGGGGCTTTGCTTGCTTTGTGTACCAAAGTAGTATTGAGAGTCGAAGGAAGCGCATCATCATCTTTAGAAAAAGAAATTGAAGCCAAACTGAAACTCCTCAACAAGCCTGCGATAAGAACCATTAAGAGTGAAGATGGGGATATTATTGACTGCGTGGACATCTACAAACAACCTGCTTTTGACCACCCTGCCTTGAAAAACCACACTATACAGAGGGTACCCAAATTTTTGCTAGAATCCCATAATTCAAGTACAAAAGATGGTTCACGGTCAATTCCTGGGGTGTTTCAGACATGGCAGAAAAGTGGAAGTTGTCCAAAAGGAACGGTCCCTATTCGCAGAATTCTAAAGGAGGACTTACTTAGAGCTGCTTCTCTCGACAGCTTCGGAAGACAACCCCCAGAACTATTCATCAATTCAACAAACTCTGATTCCGCAAAACTCAATGGCACCAATGCATATCCAGAAAATCGCACGGTATATGCATCATATCTTTTCACAACCTTGTATAATTATATAGGCGCAGAAGCAGATATTAACCTTTGGAATCCAAGGGTTGATTTACCTGAAGATTTCACTACAGCTCAATTGCGGCTTAAGGCTGGTGGCGATTCTACCACTGATTTTCAAAGCGTCGAAACAGGATGGATGGTGAATCCAAGGTTATATGGTGACAGAGCCACCCGGTTATTTATCTCCTGGACTAAGGATTCATACAAAACAACAGGTTGCTTTGATCTTACTTGCCCTGGGTTTGTGACAACAGGCCAACTAGCGCTTGGTGCTACCTTTTCAGCTATCTCATCGCAATCTGGCAAACAGTATGAATTCAACGCTGCAATGGTCTGGGATTCTTCCTCAGGGAATTGGTGGGTTAAAGTGAATAACAACATGACTGTGGGTTATTTTCCTGGTAAATTATTTGGGCCCGGCGGTTTACAACACAGTGCCACATCAGTTGAATTTGGTGGACAAGTGTACAGTCCACAGATCAGAAAAAAGCCTCACACAGCAACAGCTATGGGAAGTGGAGAATTTGCAACTGGTAGACTTGGGTTCGCATGCTACATGCGCAATTACCTCATTAAGGATTATTCACAACAACTCAAGTACCCTCCATATGCACAAGTAACGTCTGAAGAACCTGACTGTTATGACGCCGTCAATGATGTTCAGCCTCGCGAAGAACCTTACTTCTTTTTTGGAGGGCCCGGACGAAAACCTCCTTTTTGTCCTTGA 1272 0.4332 MGKLKVAIVLFGALLALCTKVVLRVEGSASSSLEKEIEAKLKLLNKPAIRTIKSEDGDIIDCVDIYKQPAFDHPALKNHTIQRVPKFLLESHNSSTKDGSRSIPGVFQTWQKSGSCPKGTVPIRRILKEDLLRAASLDSFGRQPPELFINSTNSDSAKLNGTNAYPENRTVYASYLFTTLYNYIGAEADINLWNPRVDLPEDFTTAQLRLKAGGDSTTDFQSVETGWMVNPRLYGDRATRLFISWTKDSYKTTGCFDLTCPGFVTTGQLALGATFSAISSQSGKQYEFNAAMVWDSSSGNWWVKVNNNMTVGYFPGKLFGPGGLQHSATSVEFGGQVYSPQIRKKPHTATAMGSGEFATGRLGFACYMRNYLIKDYSQQLKYPPYAQVTSEEPDCYDAVNDVQPREEPYFFFGGPGRKPPFCP. 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01287 423 Gene3D - 189 313 - -
Seca4g01287 423 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 37 417 - -
Seca4g01287 423 Pfam Neprosin 201 415 IPR004314 -
Seca4g01287 423 Pfam Neprosin activation peptide 51 158 IPR025521 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01287 Seca-Chr4 20291470 20297233 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01287 - - gmx:100804570 472.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01287 4 20291470 20297233 Seca4g01287 4 20291470 20297233 ECH
Seca4g01287 4 20291470 20297233 Seca4g01286 4 20254953 20259894 PCT