Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02714 ATGACCCAGTCTCAAAATCTCCTAAATGTCTACACATATAACGACTCACATGGAGCCAGCGAGATCACGTTTGCACCATATGTGAAGTGGTCCAAAACAGCACAGATCCCTTTATCACGGATGGGAAAGAAAGGACGAAGCTGGTTCTCTTCGGTGAAGAAAGTATTCAAGTCATCTTCTAAAGATTTGCCCCTGCCGGTGCCGGAGAAGAAGAAGGAAAACAGAGAGAAATTGCAGCATGAAGTGGCAGAGGTGGTGTCTTTTGAGCATTTTCCTGCAGCAGAGAGTTCCCCTGATGTCACCAACGAGGAGAGTATCACATCAACAGCTGTGACTGAAGATAGAAATCATGCCATTGTCGTTGCAGCAGCAACTGCTGCAGCTGCTGAAGCTGCTGTGGCAGCTGCTCAAGCAGCTGCTAGAGTTGTGAGGTTGGCAGGTTATGGACGCCACTCCAAGGAAGAAAGAGCAGCAACACTTATTCAATCTCACTACAGAGGCTACCTGGCTCGACGAGCATTGCGGGCATTGAAGGGATTAGTGAGGCTGCAAGCACTAGTGAGGGGACACAATGTGAGGAAGCAAGCGCAGATGACGATGCGGTGTATGCAGGCATTGGTGAGGGTACAGGCACGAGTGCGAGCACGGCGGCTCCAGTTGAGTCACGAGGAGGAGGAGGAGGAGGAAGAGGAGCAAAGAGAATTTGTGAAACAAGAGCCTAAGCCCATGATGAGCCCCATGAGAAGGAGGAGGTTAGAGATGAATGATTGGGACAATAGGCGTCAAAGTAGCCACACAATCAAAGAAAACGATTTGCGGAAACATGAAGCTGTAATGAAGAGGGAGAGAGCTCTTGCTTACGCTTTCAACTATCACCAGCAACAGCAGAAGCAATTTGTGCAGACAGAGTCGAATAGTGAGGATATGGGAACTGAGCATGAAAAAGCCCAGTGGGGTTGGAACTGGTTGGACCGTTGGATGTCATCACAACCATACAATGTTAGGCCCTTGGGCCCACGTGAGACCTCTTACATGACACTTGCTTCCACAACATCAACTACCACGGATAACATGTCCGAGAAGACCGTAGAAATGGACATGGCTGTAACTCCAGGCCCAAGCAATACCCACGTGGGCCTCAAGAGCCAGGACTTTCTCGATTCAAGCCCGACTTCTAATAGGCACCATCAGAGGCCCCCCAGCCCAAGTAGACCTAGCTATATGTCCCCAACACAGTCTGCAAAGGCCAAGGTTCGGAGTCAAGGCCCAGCTAAGCCACGGGCTTCACCTGGGCCTCACTGGAACTCCTCAACAAAGGGCAGCTCTGTTATTGGGTCGGGCTGTGACTCGTCAAGCTCGGGTGGAGGAACTACTGCTTACCAATTTGCAAGAAGCCCAAGCCCAAAAATTAATGGGTTTCGTTCGCAGTCCAGAAGGATCGTGGGTGGCAGTCAAGATTACGTTGAGGATTGGGCCCTTCCACTTGGAGCCTATGGTTGGGCATAA 1506 0.5053 MTQSQNLLNVYTYNDSHGASEITFAPYVKWSKTAQIPLSRMGKKGRSWFSSVKKVFKSSSKDLPLPVPEKKKENREKLQHEVAEVVSFEHFPAAESSPDVTNEESITSTAVTEDRNHAIVVAAATAAAAEAAVAAAQAAARVVRLAGYGRHSKEERAATLIQSHYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMQALVRVQARVRARRLQLSHEEEEEEEEEQREFVKQEPKPMMSPMRRRRLEMNDWDNRRQSSHTIKENDLRKHEAVMKRERALAYAFNYHQQQQKQFVQTESNSEDMGTEHEKAQWGWNWLDRWMSSQPYNVRPLGPRETSYMTLASTTSTTTDNMSEKTVEMDMAVTPGPSNTHVGLKSQDFLDSSPTSNRHHQRPPSPSRPSYMSPTQSAKAKVRSQGPAKPRASPGPHWNSSTKGSSVIGSGCDSSSSGGGTTAYQFARSPSPKINGFRSQSRRIVGGSQDYVEDWALPLGAYGWA* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02714 501 ProSiteProfiles IQ motif profile. 154 182 IPR000048 GO:0005515
Rops9g02714 501 MobiDBLite consensus disorder prediction 368 475 - -
Rops9g02714 501 Coils Coil 208 239 - -
Rops9g02714 501 ProSiteProfiles IQ motif profile. 178 205 IPR000048 GO:0005515
Rops9g02714 501 PANTHER IQ-DOMAIN 5-RELATED 41 439 - -
Rops9g02714 501 SMART iq_5 153 175 IPR000048 GO:0005515
Rops9g02714 501 SMART iq_5 176 197 IPR000048 GO:0005515
Rops9g02714 501 MobiDBLite consensus disorder prediction 375 418 - -
Rops9g02714 501 MobiDBLite consensus disorder prediction 431 475 - -
Rops9g02714 501 Gene3D - 151 205 - -
Rops9g02714 501 MobiDBLite consensus disorder prediction 219 239 - -
Rops9g02714 501 Pfam IQ calmodulin-binding motif 155 175 IPR000048 GO:0005515
Rops9g02714 501 Pfam IQ calmodulin-binding motif 181 196 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02714 Rops-Chr9 51055399 51064458 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02714 41 469 IQD Protein Family AT3G49260 51.852 2.55e-103 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02714 - - gmx:100798026 555.444