Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02136 ATGGCGACGAATCTGAACGACCCAAATTTCACATCCAAGGAAGACCCTTCTTCTTCTTCTTCTTCTTCCCCACTTTGTTTCAGCGATTTCCCTGAAGATGTTCAGCTCTGCATCCTCTCATTCCTCGGCCCCTCTGAAATCGCCACCTTCGCCTGCACCTCAAAACGGTTCGTTTCACTCTGCGCCAACGACACCAAACTCTGGTTTACCCTTTGCGACAGAAGATGGGGTTCGAAGACCCAAATCAACAAATGGGGCAAAGGGAAAATTGCCTTCAAGCTCCTCTACAATACCCTTCACGAATGGGAGAATCTGATTGGGTTCTGGCGAAGAAGCGGTTCAGGAAGCCCCGTTTTTTCTTCACCTTCCTTGCTTTTCTTCGAGTGGGGCCCATCATTTCTTGAGGCTTCTAGGGTTTCCCCTTCACAATCTGGAACCTATGGAGTCATAAAGGTGCCTTTTTTACGGATGGGTATCTCTGAAGAAGGACATGTTGTGAACTTTTTGAATCCCGATGGGCAAGCTGATTATGAGAATGAGAATGAATTGATTCATGTTAGTGTTAGTTTCATGGGGAAAAATCATTTTGTTGTGGAGGATAATCAATTCAGGAGAAGTTCGAGTTTTTCGAATCTTAGTGGTGAAGATTGCAACATTGGAGAAGATATGATTGGAGTTGAAAGTGGATCGCCACCTGGGAGCTTGCCGGATCGGTTGATGTCGGAGATTTATCAGCGTTTCGCGAATAGGACTAGTCCTGGAAGTGAGAGATCGAGGAGGCAAAGGAGGAGGGAGAAGGAAAGGTTGGCTAGGAGGAAATGGGAGCCTGAGCATTTTGTCAAGATTGTGAATTGCTCACCAACGCTGTCACGGCCTTTGCAAGGACTGTGGAAGGGAATTTGTGATGACATGAGTTTAGCCTTTTACCTTGTGGTGTATGATGACATCGGAGGCATTGCTTGCCGAAGGCTTGGGGATCCTCCAGAACCTTTCTCCAGTTATGCGCTGGTTTTCTGGACGTCTAATGCTACATTTTTGGAATCTCCCTTTTCTCTCAAGGAAGAATCTTTGTATGACAGTCGCATTCATCTTCGACCACTTCAACCACAAAATGAAATCCATGAGCAGTTCCTTTTGTCAGATGATGAAGGGGTGAATCAAATTCAGCAGTTCCATTTGTCAGATGATGAAGTGGTAAATCGAGTTCTTCACATAAGTTCAAGTTATGATTTAGTTATTCCAGATCTTGCTGGAACAATAAATCCAAGGAGTGCAGAGGGAAGGATTTGGCAGTACCAGAATGGTACTTTTGGATTTGGATTCCTTCGGGACAATTTTGTCATAGACATGAAACATATTGTCCGTGATGGTTGTATTGTGGATACAGTAAATCCTTCTGCTGATTAA 1407 0.4456 MATNLNDPNFTSKEDPSSSSSSSPLCFSDFPEDVQLCILSFLGPSEIATFACTSKRFVSLCANDTKLWFTLCDRRWGSKTQINKWGKGKIAFKLLYNTLHEWENLIGFWRRSGSGSPVFSSPSLLFFEWGPSFLEASRVSPSQSGTYGVIKVPFLRMGISEEGHVVNFLNPDGQADYENENELIHVSVSFMGKNHFVVEDNQFRRSSSFSNLSGEDCNIGEDMIGVESGSPPGSLPDRLMSEIYQRFANRTSPGSERSRRQRRREKERLARRKWEPEHFVKIVNCSPTLSRPLQGLWKGICDDMSLAFYLVVYDDIGGIACRRLGDPPEPFSSYALVFWTSNATFLESPFSLKEESLYDSRIHLRPLQPQNEIHEQFLLSDDEGVNQIQQFHLSDDEVVNRVLHISSSYDLVIPDLAGTINPRSAEGRIWQYQNGTFGFGFLRDNFVIDMKHIVRDGCIVDTVNPSAD* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02136 468 SMART fbox_2 30 71 IPR001810 GO:0005515
Rops9g02136 468 ProSiteProfiles F-box domain profile. 24 71 IPR001810 GO:0005515
Rops9g02136 468 CDD F-box_SF 28 57 - -
Rops9g02136 468 Gene3D - 17 106 - -
Rops9g02136 468 MobiDBLite consensus disorder prediction 253 268 - -
Rops9g02136 468 Pfam F-box domain 27 64 IPR001810 GO:0005515
Rops9g02136 468 SUPERFAMILY F-box domain 16 98 IPR036047 GO:0005515
Rops9g02136 468 MobiDBLite consensus disorder prediction 249 268 - -
Rops9g02136 468 PANTHER F-BOX ONLY PROTEIN 48-RELATED 17 295 IPR045118 GO:0019005|GO:0031146
Rops9g02136 468 MobiDBLite consensus disorder prediction 1 24 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02136 - - tpra:123917535 666.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02136 9 39319930 39322248 Rops9g02136 9 39319930 39322248 ECH