Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02127 ATGGCTTGTGAACTTTACAAGATCAGTTCCATAGATTGGAAGCCTTCACCTGTAATAGCATTAGCCACCAGCATAGATGGCTTGAGAGTAGCGGCATCTCGCCAAGATGGTTCAATGGAGCTATGGCTAGTGTCTCCTGGTTCCATTGGTTGGCACTGTCAATTGACTATACATGGAGACCCTAACAGAAGAGTATCATCACTTATTTGGTGTCCAGATGGCTCTAATGGAATGACGTGTGGTCGCTTATTTTCATCGAATATTGATGGTTCGGTTTCTAGATGGGATCTCTTTCACTTGAAGCAGACTACTGTGCTAGAGTCCGATGGTGTCTCAATCTGGAAAATGGCTGTGGCGCCGTCTAAAAGTGATGAGATAAATGGTGAAACAAATGGTGATTGCATGGGGAACGGATATGTAAATAAATTCCACGATTCTGATGAACATGAGAACAGCGAAAGTGATGAAGATTCAGATTCATCTGATCATCTCAAGCAATCTGTTGCCGAGTATCCACGGGTAGCAATTGCTTTTGATGATGGATGTGTTAGAATTTACGATATATCCGATACAGATGAATTTATATATGTAAAATCCTTGCCTCGAGTCAAAGGACGAGTTTTAAGTGTGACTTGGAGTACAGATGCTAAATTCATATATTCAGGAAGTAGTGATGGGTTAATACGATGCTGGAATGCTACATTGGGTAATGAAATCTATAGGATTACAGCTGGACTTGGAGGTTTGGGCGGTGGGCATGAGCTTTGTATATGGTCATTACTGTCTTTAAGGTCTGGGACACTTGTTAGTGCAGACAGCAGTGGTAGTGTGCAGTTTTGGGACAGCCAACATGGAACTCTCTTGCAAGCACATTCTTTACACAAGGGAGATGTAAATGCTCTGGCAGCAGCCCCTAGTCATGATAGGGTGTTTTCTGCTGGTTGTGACGGTCAGGTTATTCTTTATAAGCTGTCTAGCCAGTCAGTGTCATCCGATGATATCAATTCTCAGACAACGACGAAGAAATGGATCTATGTTCATTATGTAAGGGCTCATACACATGATGTCAGGGCCTTGACTGTTGCTGTACCAATAAGTCAAGAAGATGCTTCGCCTGATGAGAGGACCAAAAGAGCTCGACGTCAAGAAAAGCCCATTGAGTTTAGTTACCATAAGTGGGCTCATTTGGGGGTTCCGATGCTTATCTCAGCAGGAGATGACACAAAACTCTTTGCATACCCTGTAAAAGAATTCACTAAGTTTTCTCCTCATGATATCTGTCCTGCGCCTCAGAGAACACCCATTCAACTAGTGCTCAATACTGTCTTCAGTCAATCATCAATGCTTTTAGTGCAGTCTTCGCATTGGATAGATGTTCATTTGTTGCAACTCAGAAATGTTCGCACAGCTGGAGGCTCTGCAAAGACTGAAATACTTGCCCGAGTCAAGAGTAAGGCATCTCGTAAGATAATTTGCAGCACCATTGCTAATTCAGGGGCACTTTTTGCGTACTCTGATCATGTGAAGCCTAGTCTTTTTGAATTGAAGAGGTGTGAAGTTGGAAAAATCACATGGAGTGTTAGTAGAAGGAAACTTCCTCAGAGATTACCGTTTGCCCATTCTATGATTTTTACTCACGACTCTTCTTGGTTGATAGTAGCTGGACATGATAGAAGGATATATGTTGTGGATGTCAGTAGCTCAGAACTAGTGCATACTTTTACACCCTCTCGGGATTTGCAAGATGAGGAATCACCACCAACCGAACCTCCCATAACAAGATTGTTTACTAGTTCTGATAGGCAGTGGTTGGCAGCTGTGAACTGCTTTGGGGATATATATGTATTTAACTTGGAGATACTAAGGCAGCACTGGTTCATTTCAAGGTTAGATGGTGCCTCTGTTACAGCTGGTGGATTTCCACCCCAGAACAACAATATATTGGTAGTTACAACTTCCTCAAATCAAGTGTATGCATTCGATGTAGAGGCCAGGCAGTTGGGAGAATGGTCAATTCGGCACTCATCTGATCTGCCTAGGAGATACCAGGAATTTCCTGGTGAAGTCACTGGGCTTTCATTCCCTCCCTCAGCAACTTCATCTTCGGTTGTTGTTTATAGCTCCAGGGCAATGTGCATGATTGACTTTGGGTTGCCTGTGGAGCAAGATGATAGTGATATGCTACATACTCAAGATTCAGTGGTCAAGAATTCACAAAAGTTTAATGTTAAGAAGAGGACTAAACATAGGAAAAACTTTGAAGTTTTGCTGTTAGAAAATCCAGTTTTATTTTTAGCCCATATTTCAAAAAATTCCTTCTTTATGATAGACAAACCCTGGTTGGAAGTGGTCAAAAGCTTAGAAGCCCCACCAGTTCACAGACATATTTACGGGACATAA 2400 0.4225 MACELYKISSIDWKPSPVIALATSIDGLRVAASRQDGSMELWLVSPGSIGWHCQLTIHGDPNRRVSSLIWCPDGSNGMTCGRLFSSNIDGSVSRWDLFHLKQTTVLESDGVSIWKMAVAPSKSDEINGETNGDCMGNGYVNKFHDSDEHENSESDEDSDSSDHLKQSVAEYPRVAIAFDDGCVRIYDISDTDEFIYVKSLPRVKGRVLSVTWSTDAKFIYSGSSDGLIRCWNATLGNEIYRITAGLGGLGGGHELCIWSLLSLRSGTLVSADSSGSVQFWDSQHGTLLQAHSLHKGDVNALAAAPSHDRVFSAGCDGQVILYKLSSQSVSSDDINSQTTTKKWIYVHYVRAHTHDVRALTVAVPISQEDASPDERTKRARRQEKPIEFSYHKWAHLGVPMLISAGDDTKLFAYPVKEFTKFSPHDICPAPQRTPIQLVLNTVFSQSSMLLVQSSHWIDVHLLQLRNVRTAGGSAKTEILARVKSKASRKIICSTIANSGALFAYSDHVKPSLFELKRCEVGKITWSVSRRKLPQRLPFAHSMIFTHDSSWLIVAGHDRRIYVVDVSSSELVHTFTPSRDLQDEESPPTEPPITRLFTSSDRQWLAAVNCFGDIYVFNLEILRQHWFISRLDGASVTAGGFPPQNNNILVVTTSSNQVYAFDVEARQLGEWSIRHSSDLPRRYQEFPGEVTGLSFPPSATSSSVVVYSSRAMCMIDFGLPVEQDDSDMLHTQDSVVKNSQKFNVKKRTKHRKNFEVLLLENPVLFLAHISKNSFFMIDKPWLEVVKSLEAPPVHRHIYGT* 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02127 799 Gene3D - 6 135 IPR015943 GO:0005515
Rops9g02127 799 Gene3D - 538 735 IPR015943 GO:0005515
Rops9g02127 799 SUPERFAMILY WD40 repeat-like 173 667 IPR036322 GO:0005515
Rops9g02127 799 Gene3D - 248 497 IPR015943 GO:0005515
Rops9g02127 799 Gene3D - 136 244 IPR015943 GO:0005515
Rops9g02127 799 PANTHER WD REPEAT-CONTAINING PROTEIN PCN 4 799 IPR044622 GO:0010073|GO:0035266
Rops9g02127 799 MobiDBLite consensus disorder prediction 145 164 - -
Rops9g02127 799 ProSiteProfiles Trp-Asp (WD) repeats profile. 200 241 IPR001680 GO:0005515
Rops9g02127 799 SMART WD40_4 567 617 IPR001680 GO:0005515
Rops9g02127 799 SMART WD40_4 99 187 IPR001680 GO:0005515
Rops9g02127 799 SMART WD40_4 50 96 IPR001680 GO:0005515
Rops9g02127 799 SMART WD40_4 284 323 IPR001680 GO:0005515
Rops9g02127 799 SMART WD40_4 4 43 IPR001680 GO:0005515
Rops9g02127 799 SMART WD40_4 235 281 IPR001680 GO:0005515
Rops9g02127 799 SMART WD40_4 193 232 IPR001680 GO:0005515
Rops9g02127 799 SMART WD40_4 529 564 IPR001680 GO:0005515
Rops9g02127 799 Pfam WD domain, G-beta repeat 207 232 IPR001680 GO:0005515
Rops9g02127 799 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 16 242 IPR011047 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02127 K14548 - gmx:100797494 1218.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02127 9 39225527 39232987 Rops9g02127 9 39225527 39232987 ECH