Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02126 ATGGCAGTGTTGTCAGACATTAAGGATGAGGATGAACTCGATGAAGAACCAGGCGAGGTGATCGAATCAGCACCACCCCAGAAGGTTGGTGAAGAGAGGCAACTCAGTAGTATTAACTCGGGTCTCAAAAAGAAGCTTCTCAAACTTGGAAATGGATGGGAAACCCCTGATTTCAATGACCAAGTTACTGTTTACTATGTTGGGACTTTGCTCGATGGAACAAAGTTCGATTCCACTAGGGATTCGAATCAACCTGTTACATTTACTGTTGGTCAAGGTAAAGTGTTTGCTGGGTTGGATCATGGGATTATCACCATGAAGAAGGGAGAAATAGCTTTGTTCACTTTACCTGCTGAGTCTGGAGGGGTTCCACACAATTCCAACTCGGTTGTGCAGTTTGAGGTGGAACTCATTTCGTGGATCACAGTGGTTGATGTTTACAAAGATGGGGGAATTCTCAAGAAAATTATGGAGAAGGGGAATGGGAATGAATGGCCTGGTGATCTAGATGAAGTCCTTGTGAAGTATCAGGTGGCACTAGTTGATGGCACCATTGTTGCAGAATCACCCGAAAGAGGAGTTGAATTTTATGTGAAGGATGGTCATCTTTTTCCTAGATTGCCGAAAGTAATCATGACTATGACAAAGGGAGAGAAGGCTGAATTAATTGTTCAACCTCAGTATGCCTTTGGGGAGAAGGGGAGAGAGGCCGGTGATGGGATCCATTCAATTCCCCCAAATTCAGTGCTGCATGTTAATATTGAATTGGTGTCCTTCAAGCCTGTCATAAATGTTACTGGTGACTCCATGGTGGTTAAGAAGATTCTGAAAGAAGGGGAGGGTGCTTTCACAGCCAATGAGGGTGCAGATGTTACTGTCAGCTACACAGCTATGCTAGAAGATGGTACTGTATTTGAGAAAAGAGGAATTGGTGAAACACAACCCTTGAAATTCATAACTGATGAGGAACAAGTGATTGCTGGTCTAGACCGAGCAGTGGCAACAATGAAGAAGGGTGAGAGGGCCATAGTTAATATACATCCTGATTATGCATTTGGAAACGCTGAAGTGAGAAGAGATCTTGCTATCGTGCCACCAGGCTCGAATGTAGTGTATGACATTGAGATGATGGATTTTATCAAGGAGAAGGCACCATGGGAATTGAATAGTAATGAGAAAATTGAGGTGGCTCAGAGGAAGAAAGAAGAAGGAAATTTATTATTTAAAGGTGGCAAGTATCAGCGAGCAGCGAAGAAGTATGAAAAGGCTGCTGATTTTGTTAGTGAAGATGGATCCTTTGGTGATGATGAGCAAAAGCTAGCTAAGGCATTGAGAGTGTCGTGCTGGTTGAATGGTGCAGCTTGTAGCTTTAAACTTAATGACTTTCCCGGAGCAATCATACTATGTTCTCAGGTGCTTGATGTTGAGTTTCACAATGTGAAAGCATTGTATAGACGAGCACAAGTGTATATAGAGACTGGAGACTATCTTTTAGCAGATGTTGACATCAAGAAAGCTCTTGAGGTGGACCCACAAAACAGGGAAGTAATGGTAATGAAGAAGAAACTGAAGCAACTTCAAGCTGACAGTGACAAAAAAGATGCTAAACTGTATGGAAATATGTTTGCACATAAATCAAAGGACTCATCTGTGGCAACAAAGAGATTGAAGGTTGAGAAAGAAGAGAATGAGAGGGAAAATGAAAAGGTCATGAGAATGGAAATGGACCAAGTTGCTGATAACACAGCTCCTCCTGATGGTAGTTTAATTGTTGATTCTTGTTGA 1785 0.4218 MAVLSDIKDEDELDEEPGEVIESAPPQKVGEERQLSSINSGLKKKLLKLGNGWETPDFNDQVTVYYVGTLLDGTKFDSTRDSNQPVTFTVGQGKVFAGLDHGIITMKKGEIALFTLPAESGGVPHNSNSVVQFEVELISWITVVDVYKDGGILKKIMEKGNGNEWPGDLDEVLVKYQVALVDGTIVAESPERGVEFYVKDGHLFPRLPKVIMTMTKGEKAELIVQPQYAFGEKGREAGDGIHSIPPNSVLHVNIELVSFKPVINVTGDSMVVKKILKEGEGAFTANEGADVTVSYTAMLEDGTVFEKRGIGETQPLKFITDEEQVIAGLDRAVATMKKGERAIVNIHPDYAFGNAEVRRDLAIVPPGSNVVYDIEMMDFIKEKAPWELNSNEKIEVAQRKKEEGNLLFKGGKYQRAAKKYEKAADFVSEDGSFGDDEQKLAKALRVSCWLNGAACSFKLNDFPGAIILCSQVLDVEFHNVKALYRRAQVYIETGDYLLADVDIKKALEVDPQNREVMVMKKKLKQLQADSDKKDAKLYGNMFAHKSKDSSVATKRLKVEKEENERENEKVMRMEMDQVADNTAPPDGSLIVDSC* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02126 594 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 59 260 IPR001179 GO:0003755
Rops9g02126 594 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 168 257 IPR001179 GO:0003755
Rops9g02126 594 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 284 376 IPR001179 GO:0003755
Rops9g02126 594 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 55 138 IPR001179 GO:0003755
Rops9g02126 594 Coils Coil 553 576 - -
Rops9g02126 594 SMART tpr_5 480 513 IPR019734 GO:0005515
Rops9g02126 594 SMART tpr_5 397 430 IPR019734 GO:0005515
Rops9g02126 594 SMART tpr_5 446 479 IPR019734 GO:0005515
Rops9g02126 594 FunFam Peptidylprolyl isomerase 261 382 - -
Rops9g02126 594 SUPERFAMILY FKBP-like 266 398 - -
Rops9g02126 594 FunFam Peptidylprolyl isomerase 385 540 - -
Rops9g02126 594 Gene3D - 260 383 IPR046357 GO:0003755
Rops9g02126 594 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 288 380 IPR001179 GO:0003755
Rops9g02126 594 Gene3D Tetratricopeptide repeat domain 384 540 IPR011990 GO:0005515
Rops9g02126 594 SUPERFAMILY FKBP-like 145 260 - -
Rops9g02126 594 Gene3D - 32 143 IPR046357 GO:0003755
Rops9g02126 594 Gene3D - 144 259 IPR046357 GO:0003755
Rops9g02126 594 SUPERFAMILY FKBP-like 34 142 - -
Rops9g02126 594 SUPERFAMILY TPR-like 391 544 IPR011990 GO:0005515
Rops9g02126 594 MobiDBLite consensus disorder prediction 549 568 - -
Rops9g02126 594 ProSiteProfiles TPR repeat profile. 480 513 IPR019734 GO:0005515
Rops9g02126 594 PANTHER PEPTIDYLPROLYL ISOMERASE 142 261 - -
Rops9g02126 594 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02126 Rops-Chr9 39212890 39219137 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02126 28 543 Calmodulin-binding Proteins AT3G25230 56.214 0.0 564
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02126 K09571 - gmx:100798382 880.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02126 9 39212890 39219137 Rops9g02126 9 39212890 39219137 ECH