Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02116 ATGGATCTTGGGGTGGTGAGTTTTGATGGGTTGGTGGGTTCAGACACTAGTTTTGTTGTTTCTCTTGCTTCAGATCCTGAACCAAAACACAAGTGGTGTGGATCTGGGTTCCTTAAGCAAGAGAGATCTGGCACAACTGAAGATGAATGGAGGAGTTATAAACTGGCCAAAACTGATGACATATCTGATTCCAAAGCAATGTTGCTACAACAAAGGAACACTTCACTGAGATCTAATAATGCTGCTCTATTTTCTGATGGACTTCAACAACAAATGCTGAGTTTCTCTTCTCCAAAATCAGAATCTTATTTAGTAGACAAGACCACCCCAAATGTCTCATTGCCTTATTCTTACCACCCTTTGTCTAGTTACAGCAGAAATACAGGTTACAGTTCTGGAAGCGTGCATGGGGCTTTTGTTGGTGCCAGAGGTCCGTTCACTCCTTCTCAGTGGGTGGAACTGGAACACCAAGCCTTGATCTACAAGTACATCACAGCAAATGTGCCAGTACCTTCCCATCTACTCATACCCATCAGAAAAGCACTTGATTCTGCTGGCTTCTGTAACTTCTCAAATGGACTTCTCAGACCCAATGCATTTGGTTGGGGAGGTTTCCATCTGGGATTCTCGAACAACACTGATCCTGAGCCAGGAAGGTGTAGGAGAACAGACGGGAAGAAATGGCGGTGCTCAAGAGATGCCGTTGTGGATCAAAAATATTGTGAACGGCACATGAACAGAGGACGCCATCGTTCAAGAAAGCCTGTGGAAGGCCAATCAGGCCACACTGTCACTGGAACCACCATCACCACCAATACTACTTCAAATGGTTCAAAGCTTAATGCTTCTTCTCCTTCCATTGTGGTGCCCGGCAACACTGCATCCAGCAGCCTTACCTTTGCACATCACCAGGAACCCAAGAATATGCACCACCCTCTTGCACCTGATAACAATACTTCTGCTGCCAACACCATCAACAGGATGTTCATGAATAACAAAGAGAATAATAATGTAAGTGAGAGGATGCAGGATGGCCCTGCACTTCCAATGCTGCCTCCCACTCTTGAACTGAAACCAAAGGAAAGTTCCTTTATGATTCACAAACAGGAAATGTCATATGATGAATCCTCAAGGAATAATGAGTTTGGGCTTGTCACTTCTGATTCCCTGCTGAACCCTTCACAGAAAAGCTCCACCTTGCTTAGTAGCAGAAGCTTTGGTTCTTCACAAAACCCCACTAACGGAGACACTGTGTCCCAACATTCCCTTCGGCATTTCATTGATGACTGTCCCAAAACACGTGACATGCAGTCAGATAGGACTCGGTTATCAATTTCCATCCCAATGACTTCCTCAGCCTTCATGTCATTCACTTCCTCGCCAAGCAATGAAAAGCTCACATTGTCACCTCTTAGGCTATCAAGGGAGTTAGACCCAATTCAAATGGGTTTGGGTGTGGGAAGTGCACTCAATGAATCAAACACTACTACTAGGCAAGCTAATTGGATCCCAATTACTTGGGAGAGTTCCATGGGTGGTCCTCTTGGAGAGGTTCTGAATCTTAGTAATAACAATGCAAATGATCACTGTGCCAAGAATTCTTCAGCTCTCAACCTCATGACTGATGGGTGGGATAATAGTCCTCCACTAGGGTCATCTCCAGTTGGGGTCCTTCAAAAGACAGCATTTGGATCACTTTCCAATAGCAGTGCTGCGAGCAGTCCAAGGGCAGAGAACAAGACTCAAGAAGAGGCCAGCTTGTGCAACGATCTACTTGGATCAACTCTGGGGAATGCTAATGCTTCCTCCTTACCTGCCTTGTAA 1824 0.4529 MDLGVVSFDGLVGSDTSFVVSLASDPEPKHKWCGSGFLKQERSGTTEDEWRSYKLAKTDDISDSKAMLLQQRNTSLRSNNAALFSDGLQQQMLSFSSPKSESYLVDKTTPNVSLPYSYHPLSSYSRNTGYSSGSVHGAFVGARGPFTPSQWVELEHQALIYKYITANVPVPSHLLIPIRKALDSAGFCNFSNGLLRPNAFGWGGFHLGFSNNTDPEPGRCRRTDGKKWRCSRDAVVDQKYCERHMNRGRHRSRKPVEGQSGHTVTGTTITTNTTSNGSKLNASSPSIVVPGNTASSSLTFAHHQEPKNMHHPLAPDNNTSAANTINRMFMNNKENNNVSERMQDGPALPMLPPTLELKPKESSFMIHKQEMSYDESSRNNEFGLVTSDSLLNPSQKSSTLLSSRSFGSSQNPTNGDTVSQHSLRHFIDDCPKTRDMQSDRTRLSISIPMTSSAFMSFTSSPSNEKLTLSPLRLSRELDPIQMGLGVGSALNESNTTTRQANWIPITWESSMGGPLGEVLNLSNNNANDHCAKNSSALNLMTDGWDNSPPLGSSPVGVLQKTAFGSLSNSSAASSPRAENKTQEEASLCNDLLGSTLGNANASSLPAL* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02116 607 ProSiteProfiles QLQ domain profile. 145 180 IPR014978 GO:0005524|GO:0005634|GO:0006355
Rops9g02116 607 MobiDBLite consensus disorder prediction 258 283 - -
Rops9g02116 607 SMART QLQ_2 144 180 IPR014978 GO:0005524|GO:0005634|GO:0006355
Rops9g02116 607 ProSiteProfiles WRC domain profile. 214 258 IPR014977 -
Rops9g02116 607 PANTHER GROWTH-REGULATING FACTOR 5 90 453 IPR031137 GO:0005634|GO:0006351|GO:0032502
Rops9g02116 607 MobiDBLite consensus disorder prediction 386 421 - -
Rops9g02116 607 Pfam QLQ 145 179 IPR014978 GO:0005524|GO:0005634|GO:0006355
Rops9g02116 607 Pfam WRC 215 257 IPR014977 -
Rops9g02116 607 MobiDBLite consensus disorder prediction 247 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02116 Rops-Chr9 38992209 38995932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02116 28 564 GRF Transcription Factor Family AT2G22840 44.086 3.47e-106 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Rops9g02116 WRC 5.7e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02116 - - cam:101496763 801.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02116 9 38992209 38995932 Rops9g02116 9 38992209 38995932 ECH