Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02102 ATGAAGGAAGACGGAGGTGGTAAGAACGAAGAGAAAAGCGTAGATATCAAGCTTTGGGGAGTTTTTCTCTTCGGTGTAATTTGCGCCACCGCCACTACCTTGGCCCTGTCCAGGTCGCAGAGAGGAGGTAGTGGCAGTTCTTTCCGATCAGCTTTTCAAGAAGAAGCACGGAAGAGATATAACAAGCGATTACAAGAGGAATACGAGGAAGAGATGGAGAGAGTGGAACGAATAAAGCGTATGCAAAGTGTGTTTAATAGAGAAAGGAACAAGTATAGAAGCAGCTACGAGAGCTGGAAGGAAAATGGTTCTGGTGCATATCATCAGCATTTCCAGAGAGATGATTGGTATTGGAAGGCTGAAGCAAACTTCAGAGAACAGTGGAAAAATCAACAAGACACTCCAAGAGAGAGCAGAAATTATTCATTATCACATCACTATTCAGTTTTGGGTCTTGACAGGTTTAGAACAACACCATATACAGATGCTGAGATTAAGACAGCATTTAGGAGTAAGGCAAAGCAGTATCATCCTGACCAGAACCAGGATAATAGAGAGGCTGCTGAGGCCAAGTTCAAAGAAGTAATGTGTTCATATGAGACCATACAACAGGAAAGAAAGAACCAGAATCTGTAA 636 0.4261 MKEDGGGKNEEKSVDIKLWGVFLFGVICATATTLALSRSQRGGSGSSFRSAFQEEARKRYNKRLQEEYEEEMERVERIKRMQSVFNRERNKYRSSYESWKENGSGAYHQHFQRDDWYWKAEANFREQWKNQQDTPRESRNYSLSHHYSVLGLDRFRTTPYTDAEIKTAFRSKAKQYHPDQNQDNREAAEAKFKEVMCSYETIQQERKNQNL* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02102 211 Gene3D DnaJ domain 138 211 IPR036869 -
Rops9g02102 211 SMART dnaj_3 144 207 IPR001623 -
Rops9g02102 211 SUPERFAMILY Chaperone J-domain 143 209 IPR036869 -
Rops9g02102 211 Coils Coil 61 81 - -
Rops9g02102 211 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 7 209 - -
Rops9g02102 211 ProSiteProfiles dnaJ domain profile. 145 207 IPR001623 -
Rops9g02102 211 CDD DnaJ 146 201 IPR001623 -
Rops9g02102 211 Pfam DnaJ domain 146 209 IPR001623 -
Rops9g02102 211 PRINTS DnaJ domain signature 187 207 IPR001623 -
Rops9g02102 211 PRINTS DnaJ domain signature 169 184 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02102 Rops-Chr9 38618837 38629499 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02102 138 210 Miscellaneous Gene Families AT5G49580 36.986 5.68e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02102 - - gmx:100804936 330.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02102 9 38618837 38629499 Rops9g02102 9 38618837 38629499 ECH
Rops9g02102 9 38618837 38629499 Rops10g01193 10 24302424 24305651 PCT