Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02091 ATGGATTTCATGAAGGTCTTCGATCAAACCGTTCGAGAAATAAAGAGAGAAGTGAATCTGAAGGTTCTCAAGGTTCCCGAAATCGAACAGAAGGTGTTGGATGCAACTGATAATGAACCTTGGGGTCCTCATGGTACTGCATTGGCAGAGATTGCGCAGGCTACCAAAAAATTTACTGAATGTCAACTGGTCATGAATGTCCTTTGGACAAGACTGAGTGAAACTGGAAAGGATTGGCGATATGTATACAAGGCATTAGCTGTTATAGAGTATTTGGTAGCACATGGATCTGAACGTGCAGTTGATGACATTATAGAACATACTTTTCAGATCTCAGCACTTTCTAGTTTTGAATATGTTGAGCCCAGTGGGAAGGATGTGGGACTCAATGTCAGGAAGAAGTCAGAAAACATTGCGGCCCTTTTGAATGATAAAGATAAGATACAAGAAGTCAGAAATAAAGCTGCTGAAAACCGTGACAAGTACGTTGGAGTTTCTTCTAGTGGAATCACATACAAGTCTGGGCCATCCTCATATAGTGGTGGCAGCTATCAGAGCAGTAGTAAATATGGAGGCTTTGGTTCAAGAGATGGTGACAGGTTTACTGATAGCTATAGAGACAGGGGGCACTATGAAGAAGAAAAAGTTGAAAAAGATTACCCTGGAAAATCACATCGTGGTGTCACAAGTGACAATCAAGAGAACTCCTTCAAGAAGGGTTCTGCACGGTCTGTCAGCAAAAATCAGGAGAACTTGTCATCTAGATCAAAGTCATCTACTAATGCAAAGAGTTCAGTTCCTTCTCAAAGTTCAAGTGTATCTGCAAACAATACTGAGGATGACTTTGACGATTTTGATCCGAGAGGAACTTCTACTAAGGCTTCAGCTGGAAGCTCAAACCAAGTTGATCTCTTTGGACAAGATTTAATTGGTGACCTCATGGATGCTCCAACATCTGTTTCCGTAGAAAAGCCTGCAACTAGTGATGTTTTGGAGGTTGATCTCTTTGCAGATTCAGCATTTGTATCAGCGGCACCTCATTCGGACAAAGGAGCTAGTTCTCAGCCACAGGGTGAAGTGGATCTATTTTCTTCACAACCAGCCATTCCTTCAGTTACACCAACAGTTGACTTGTTTTCCATTCCTGAACCAGCTGTGCAGCCTGACAGCAAGTCAGAAAATACTGTTCCTATGAATAATAGCACTGTTGATCCCTTCGCTGCTGTTCCCCTTAATAATTTTGATGGATCTGATGTTTTTGGTGAATTCACTTCTCAATCTAATCCTGTATCTTCACAGCCTTCAAATAATGTTGTCAGCGGTGGCAGCCATGATAATATGAATGGTAAATCTTTAGTAGAATCTAAAGTTTCACCTAAAAAGGATTCTTTCCAGGTGAAGTCTGGCATTTGGGCTGATTCACTAAGCCGTGGATTGATTGATCTCAATATATCCGCCCCCAAAAAAGTAAACCTTTCGGATGTTGGAATTGTGGGTGGATTGAGTGATGGATCAGATGAAAGGGAGAAAGGCCCTCCACCTTCATTTTACATGGGGAGAGCTATGGGTTCAGGATCTGGTCTTGGTAGGCCTGGGTTCACTCCTACACAGCCAGCAACTGGAGATGACATATTCTCAAACTTTGGCAACCAACAGTATCAATTTGGTGGGTTCCAAAAGTAA 1683 0.4207 MDFMKVFDQTVREIKREVNLKVLKVPEIEQKVLDATDNEPWGPHGTALAEIAQATKKFTECQLVMNVLWTRLSETGKDWRYVYKALAVIEYLVAHGSERAVDDIIEHTFQISALSSFEYVEPSGKDVGLNVRKKSENIAALLNDKDKIQEVRNKAAENRDKYVGVSSSGITYKSGPSSYSGGSYQSSSKYGGFGSRDGDRFTDSYRDRGHYEEEKVEKDYPGKSHRGVTSDNQENSFKKGSARSVSKNQENLSSRSKSSTNAKSSVPSQSSSVSANNTEDDFDDFDPRGTSTKASAGSSNQVDLFGQDLIGDLMDAPTSVSVEKPATSDVLEVDLFADSAFVSAAPHSDKGASSQPQGEVDLFSSQPAIPSVTPTVDLFSIPEPAVQPDSKSENTVPMNNSTVDPFAAVPLNNFDGSDVFGEFTSQSNPVSSQPSNNVVSGGSHDNMNGKSLVESKVSPKKDSFQVKSGIWADSLSRGLIDLNISAPKKVNLSDVGIVGGLSDGSDEREKGPPPSFYMGRAMGSGSGLGRPGFTPTQPATGDDIFSNFGNQQYQFGGFQK* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02091 560 MobiDBLite consensus disorder prediction 424 458 - -
Rops9g02091 560 SMART enth_2 26 152 IPR013809 -
Rops9g02091 560 MobiDBLite consensus disorder prediction 424 453 - -
Rops9g02091 560 PANTHER EPSIN/ENT-RELATED 4 532 - -
Rops9g02091 560 ProSiteProfiles ENTH domain profile. 20 152 IPR013809 -
Rops9g02091 560 MobiDBLite consensus disorder prediction 174 299 - -
Rops9g02091 560 Coils Coil 131 158 - -
Rops9g02091 560 FunFam Clathrin interactor 1 18 165 - -
Rops9g02091 560 SUPERFAMILY ENTH/VHS domain 24 165 IPR008942 -
Rops9g02091 560 MobiDBLite consensus disorder prediction 501 546 - -
Rops9g02091 560 MobiDBLite consensus disorder prediction 226 278 - -
Rops9g02091 560 Gene3D - 24 164 IPR008942 -
Rops9g02091 560 CDD ENTH 28 144 - -
Rops9g02091 560 Pfam ENTH domain 27 147 IPR013809 -
Rops9g02091 560 MobiDBLite consensus disorder prediction 199 225 - -
Rops9g02091 560 MobiDBLite consensus disorder prediction 174 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02091 Rops-Chr9 38343264 38349950 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02091 K12471 - gmx:100809198 886.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02091 9 38343264 38349950 Rops9g02091 9 38343264 38349950 ECH