Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02090 ATGCTGAGTTCCGATCACATGGCTTCTTCTCTTTCTCCCACTCCCTCTTATTTCACTCACCTTCCTCTTCCTCTTCCTTCCTCTTCTCCCTCTCATCCCGGTGAGAAGAAGCTTCTGGAAAACGACGAAACACGCGTTCCGATTCATGTTGTGACCACAGCGTCTCAACTTCCTGTTGAATTTCTGGAACCCTCACCTCAAAAACTGCTCGTAATTGGTTTTGATTGCGAGGGTGTTGACTTGTGTCGCAATGGCACTCTTTGCATTATGCAGCTTGCATTTCCTGATGCTATATACCTGGTTGATGCAATCCAAGGCGGAGATGAGCTTATCAAAGCCTGTAAGCCCGCACTTGAGTCTAATTACATCACAAAAGTGATTCATGATTGCAAACGGGATAGTGAGGCATTGTACTTTCAGTTCGGCATCAAGTTAAACAACGTGGTGGATACCCAGATTGCCTATTCACTTATAGAGGAGCAAGAAGGACGAAAGAAATCGCCAGATGACTACATTTCATTTGTTGGCCTCCTTGCAGATCCACATTACTGTGGCATATCTTATCTTGAGAAGGAAGAAGTTCGTGTCCTCCTTCGACAGGACCCCAAGTTTTGGACTTACAGACCTTTATCTGAACTAATGGTCCGTGCTGCCGCTGATGATATCCGTTTTCTTCTCTACATTTATCACCAAATGATGGAGAAATTAAATGAACGGTCTTTATGGTATCTTACTGTTCGTGGGGCCTTGTATTGCCGATGTTTCTGTGTGAACAGTAATGATTATGCTGATTGGCCATCTCTACCTCCAATTCCAGATAATCTGAAAGCTGATGGAAATGGTCCTGAGGAAGAAATTCTTTCAGTTCTTGATGTTCCCCCAGGAAAGATGGGACGTGTTATTGGGAAAAAAGGGGCTACGATTTTGTCAATTAAGGAGTCTTGCAATGCGGAAATTCTGATTGAAGGTGCCAAGGGCCCACGTGACAAGGTTTTCATCATGGGACCAGTGAAGCAGGTGAGGAAAGCTGAGGCCATGTTAAGGGGTAGAATCTTGGATATGTAG 1065 0.4451 MLSSDHMASSLSPTPSYFTHLPLPLPSSSPSHPGEKKLLENDETRVPIHVVTTASQLPVEFLEPSPQKLLVIGFDCEGVDLCRNGTLCIMQLAFPDAIYLVDAIQGGDELIKACKPALESNYITKVIHDCKRDSEALYFQFGIKLNNVVDTQIAYSLIEEQEGRKKSPDDYISFVGLLADPHYCGISYLEKEEVRVLLRQDPKFWTYRPLSELMVRAAADDIRFLLYIYHQMMEKLNERSLWYLTVRGALYCRCFCVNSNDYADWPSLPPIPDNLKADGNGPEEEILSVLDVPPGKMGRVIGKKGATILSIKESCNAEILIEGAKGPRDKVFIMGPVKQVRKAEAMLRGRILDM* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02090 354 ProSiteProfiles Type-1 KH domain profile. 285 347 - -
Rops9g02090 354 Pfam 3'-5' exonuclease 66 236 IPR002562 GO:0003676|GO:0006139|GO:0008408
Rops9g02090 354 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 280 352 IPR036612 GO:0003723
Rops9g02090 354 SMART 35exoneu6 48 237 IPR002562 GO:0003676|GO:0006139|GO:0008408
Rops9g02090 354 Gene3D K Homology domain, type 1 275 352 IPR036612 GO:0003723
Rops9g02090 354 SMART kh_6 284 352 IPR004087 GO:0003676
Rops9g02090 354 CDD KH-I 289 348 - -
Rops9g02090 354 Gene3D - 4 253 IPR036397 GO:0003676
Rops9g02090 354 PANTHER EGALITARIAN, ISOFORM B 37 352 - -
Rops9g02090 354 CDD Egl_like_exo 61 256 - -
Rops9g02090 354 SUPERFAMILY Ribonuclease H-like 35 265 IPR012337 -
Rops9g02090 354 Pfam KH domain 290 348 IPR004088 GO:0003723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02090 K18740 - gmx:100788577 577.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02090 9 38332010 38340375 Rops9g02090 9 38332010 38340375 ECH