Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02083 ATGGATTTTTCTAAAATGTTTAAGCTCCTCTCTTTCATCTGCATCGCTACCCTTGTCTCCGGTGGCCGTGACTTTGCCGGAGACACTCTCCGGTTGCCTTCCCAAGCCTACTCCAGGTTCTTCCATGAACCTGAGAGTGATGACAACGTTCAAGGGACCAGATGGGCTATTTTGATTGCCGGTTCCAACGGCTACTGGAATTACAGGCATCAGGCTGATGTTTGTCATGCATACCAAATACTGAGGAAAGGTGGCCTGAAAGAAGAAAATATTATTGTTTTTATGTTTGATGACATTGCTTTCGATGAAGAGAACCCAAGGCCTGGAATCATCATTAACAAACCAGATGGGGATGATGTTTATGAAGGAGTTCCAAAGGATTATACTGGCAGTGATGTTACTGCTGCAAACTTTTTTGCTGCTTTACTTGGAAATAAGTCAGCTCTTACTGGTGGCAGTGGGAAGGTTGTGGATAGTGGCCCTGATGATCATATATTTATATACTACACTGATCATGGAGGTCCAGGAGTGCTTGGGATGCCTGTTGGTCCTTACATATATGCATCTGATCTGATTGATGTCTTGAAGAAAAAGCATGCTTCTGGAACGTATAAAAACCTAGTATTTTATCTGGAGGCATGTGAATCTGGGAGTATCTTTGAAGGTCTTCTTCCTGAAGATATCAATATCTATGCAACAACAGCTTCAAATGCAGAAGAAAGCAGTTGGGGAACATATTGCCCTGGGGAGTACCCTAGTCCTCCTCCAGAATATACAACCTGCTTGGGTGACTTGTACAGTGTTGCTTGGATGGAAGACAGTGACATACACAATTTGCGAACTGAAACTTTGCACCAACAGTATAAATTGGTTAAAGAGAGGACTATCAATGGAAGTCCATACTATGGCTCTCATGTGATGCAATATGGTGATATAGGGCTTAACAGTAATTCTCTCTTCCTATATATGGGTACAAATCCTGCTAATGATAATTTTACTTTTGTGGATGAAAACTCCTTGAGGTCACCTTCAAAAGCAGTCAACCAACGGGATGCTGATCTCATTCATTTCTGGGATAAGTTCCGCAAAGCTCCTGAGAATTCTCCTAAAAAAGATACAGCTCAGAAACAAGTTCTGGAAGCAATGTCTCACAGAATGCATATAGACAACAATGTGAAACTTATTGGAAAGCTCTTATTTGGCATTGTAAAGGGTCCAGAAGTGCTCAACACTGTCAGACCTGCCGGGTTACCACTTGTTGATGATTGGGACTGCTTGAAAACCATGGTAAGGACTTTTGAGACACATTGTGGATCCTTGTCTCAGTATGGGATGAAACATATGAGGTCCTTTGCAAACATCTGCAATGTAGGAATACATCATGAGCAAATGGCTGAGGCCTCTGCACAAGCTTGTGTCAGTATTCCTACCAATCCCTGGAGTTCTCTGCAAGGGGGTTTCAGTGCATAA 1470 0.4245 MDFSKMFKLLSFICIATLVSGGRDFAGDTLRLPSQAYSRFFHEPESDDNVQGTRWAILIAGSNGYWNYRHQADVCHAYQILRKGGLKEENIIVFMFDDIAFDEENPRPGIIINKPDGDDVYEGVPKDYTGSDVTAANFFAALLGNKSALTGGSGKVVDSGPDDHIFIYYTDHGGPGVLGMPVGPYIYASDLIDVLKKKHASGTYKNLVFYLEACESGSIFEGLLPEDINIYATTASNAEESSWGTYCPGEYPSPPPEYTTCLGDLYSVAWMEDSDIHNLRTETLHQQYKLVKERTINGSPYYGSHVMQYGDIGLNSNSLFLYMGTNPANDNFTFVDENSLRSPSKAVNQRDADLIHFWDKFRKAPENSPKKDTAQKQVLEAMSHRMHIDNNVKLIGKLLFGIVKGPEVLNTVRPAGLPLVDDWDCLKTMVRTFETHCGSLSQYGMKHMRSFANICNVGIHHEQMAEASAQACVSIPTNPWSSLQGGFSA* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02083 489 Pfam Peptidase C13 family 54 324 IPR001096 GO:0006508|GO:0008233
Rops9g02083 489 CDD legumain_C 351 472 - -
Rops9g02083 489 PIRSF Legumain 1 489 IPR001096 GO:0006508|GO:0008233
Rops9g02083 489 Gene3D - 349 477 IPR046427 -
Rops9g02083 489 FunFam Vacuolar-processing enzyme beta-isozyme 52 348 - -
Rops9g02083 489 Gene3D - 52 348 - -
Rops9g02083 489 PIRSF AE 1 489 IPR043577 GO:0004197|GO:0051603
Rops9g02083 489 PRINTS Hemoglobinase (C13) cysteine protease signature 127 142 IPR001096 GO:0006508|GO:0008233
Rops9g02083 489 PRINTS Hemoglobinase (C13) cysteine protease signature 204 220 IPR001096 GO:0006508|GO:0008233
Rops9g02083 489 PRINTS Hemoglobinase (C13) cysteine protease signature 80 109 IPR001096 GO:0006508|GO:0008233
Rops9g02083 489 PRINTS Hemoglobinase (C13) cysteine protease signature 55 79 IPR001096 GO:0006508|GO:0008233
Rops9g02083 489 PRINTS Hemoglobinase (C13) cysteine protease signature 155 174 IPR001096 GO:0006508|GO:0008233
Rops9g02083 489 FunFam Vacuolar-processing enzyme beta-isozyme 349 477 - -
Rops9g02083 489 PANTHER HEMOGLOBINASE FAMILY MEMBER 28 473 IPR001096 GO:0006508|GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02083 Rops-Chr9 38209137 38214999 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02083 K01369 - gmx:547700 855.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02083 9 38209137 38214999 Rops9g02083 9 38209137 38214999 ECH