Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00508 ATGTCTTCGCTTGCGGCTGCTAGAGCGGATAACTTTTACTATCCACCAGAATGGGACCCAAGTCAGGGTTCGCTGAACAAGTTTCATGGCCAACATGCCTTGCGGGAGAGGGCAAGAAAATTAGATCAGGGCATCCTGATTATAAGGTTTGAGATGCCTTTTAACATATGGTGTGGAGGATGCAATTCGATGATTGCGAAGGGTGTCCGGTTCAATGCAGAGAAAAAACAAGTTGGAAATTATTACTCAACAAGGATATGGAGTTTTACCATGAAGTCTGCATGTTGTAAACATGAGATTGTCATTCAGACTGATCCTAAGAACTGTGAATATGTCATTATTAGTGGGGCCCAGAAAAAAACTGAAGATTTTGATGTTGAGGATGCAGAAACTTTTGAATTACCTGCTGATGAAGAAAGGGGTAAGCTTACAGATCCATTTTACCGCCTTGAACACCAGGAAGAAGATTTGAAAAAAAAGAAGGAAGCTGAACCAGTGCTTGTGCGTCTCCAGCGGCTGTCTGATACCAGGCATTCAGATGACTATGCTCTCAATAAGACTCTCCGAGCCCGGCTCAGAAGTCAAAAGAAAAGAGTTGCTGAAGAAGAGATTGCTTCCAGGAAAAGAGGCCTTGGCATAAGACTACTTCCAGCTACAGAACAAGATACCACTACTGCAAAACAAGTGAAGTTTTCAAATAAGTTTGACAAGAATAGGAAGGATAAGCGGGCATTAATCAATTCTGCATCCATCTTCCATGGATTGTCTAACTCTTCCATATCTGATAAGAGAAGACTAGAACTGGAGTCTAAAAGAAGAAAAATTTCTGCAAGTGCAGCATCCAACCTTCTAGCTGGTGGGTTTAAGCCATCATCATGGTCTCAGGGTACTGTTTCTTCAAGCAGGCAAAAAGGAGCTTCAATGACTGTAAGACGTTAG 939 0.4217 MSSLAAARADNFYYPPEWDPSQGSLNKFHGQHALRERARKLDQGILIIRFEMPFNIWCGGCNSMIAKGVRFNAEKKQVGNYYSTRIWSFTMKSACCKHEIVIQTDPKNCEYVIISGAQKKTEDFDVEDAETFELPADEERGKLTDPFYRLEHQEEDLKKKKEAEPVLVRLQRLSDTRHSDDYALNKTLRARLRSQKKRVAEEEIASRKRGLGIRLLPATEQDTTTAKQVKFSNKFDKNRKDKRALINSASIFHGLSNSSISDKRRLELESKRRKISASAASNLLAGGFKPSSWSQGTVSSSRQKGASMTVRR* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00508 312 Pfam Saf4/Yju2 protein 13 276 IPR007590 GO:0000398
Rops1g00508 312 PANTHER SPLICING FACTOR YJU2 10 303 IPR007590 GO:0000398
Rops1g00508 312 Coils Coil 185 205 - -
Rops1g00508 312 MobiDBLite consensus disorder prediction 290 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00508 Rops-Chr1 13402669 13406462 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00508 K13115 - pop:7487586 525.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g00508 1 13402669 13406462 Rops1g00508 1 13402669 13406462 ECH