Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00507 ATGGCGTCACTTCCCTCTCTCTTTCTCTTCTTATCATTTTTCTTTCTCTTCTCTTTCAATTCATGCAACTCCATTGAATACCTAAAGCTACCATTGGTTAAAAGGGACCCACTCTCATCGCCAGCTCAGCTTCTCTCCGGCCACCATAGGTCAGTAAAGTCCCCACTTATCTCCGGCGCAATCACCGGCTCCGGCCAGTACTTCGCGGATCTCCGCATCGGGTCACCGCCGCAACGCCACCTCCTCGTCGTCGACACCGGCAGCGACCTCGTATGGGTCAAATGCTCCGCCTGTAGAGACTGCTCCAACCACCGACCCGGATCCGCATTCCTCGCCCGACACTCCAAAACGTTCTCCTCGTACCACTGCTACGACTCGCCGTGTCGACTCGTTCTTCACCCGAAACCCGACCCACATTGCAACCATACCCGACTTCACAACCCGTGTCGTTATGAGTATTCATACGCTGATGGGTCACTAACAAGTGGTTTCTTCTCGAAAGAAACGACGACGTTTAATATGAGCTCCGGCAAGGAAGTGAAAATTAAAAAACTCGCATTCGGTTGCGGGTTTCGAATCTCAGGCCCGAGCGTAACCGGTGCTAGCTTCAACGGTGCACAAGGTGTAATGGGCTTGGGCCGTGGGCCCATTTCGTTTAGTTCCCAATTGGGTCGGAGATTCGGGAACAGATTCTCTTACTGTCTACTCGACTACACCATATCACCGCCTCCGAAGAGTTACCTCACCATCGGCGGTCCCTTAAACGACGTCGTTTCGAGCAAGTTCAGTTACACGCCTTTATTAACCAACCCTCTCTCTCCCACATTTTACTACATTGCCATTGAAACCGTAACCGTCGATGGTTTGAAATTACCGATAAGCCCTTCCGTTTGGGCGATTGACCATCAGGGTAACGGCGGCACCATCTTGGACTCCGGCACGACGCTAACTTTACTAACGGTACCTGCTTACCGGCTGGTCCTGGCGGCGTTCCGGCGGCGCGTGAGTCTTCCCACGGCGGAGGGGATCACACTAGGGTTCGACCTTTGCTTGAACGTTTCCGGCGTGGCGAGGCCGAGGCTGCCGAAGTTGAAATTCGGTCTCGCCGGAAAAGCGGTGCTGTCACCGCCGGCTAGGAACTATTTCATCGAGGTGGCAGATCGGGTTTTGTGCTTAGCGATCCAACCCGTGAAACCGGGTTCCGGGTTTTCAGTTATAGGGAATCTGATGCAACAAGGTTACTTGTTTGAATTCGATGTGGACAAGTCGCGGCTCGGGTTTTCGCGTCACGGTTGTGCGGTTCGCTGA 1308 0.5352 MASLPSLFLFLSFFFLFSFNSCNSIEYLKLPLVKRDPLSSPAQLLSGHHRSVKSPLISGAITGSGQYFADLRIGSPPQRHLLVVDTGSDLVWVKCSACRDCSNHRPGSAFLARHSKTFSSYHCYDSPCRLVLHPKPDPHCNHTRLHNPCRYEYSYADGSLTSGFFSKETTTFNMSSGKEVKIKKLAFGCGFRISGPSVTGASFNGAQGVMGLGRGPISFSSQLGRRFGNRFSYCLLDYTISPPPKSYLTIGGPLNDVVSSKFSYTPLLTNPLSPTFYYIAIETVTVDGLKLPISPSVWAIDHQGNGGTILDSGTTLTLLTVPAYRLVLAAFRRRVSLPTAEGITLGFDLCLNVSGVARPRLPKLKFGLAGKAVLSPPARNYFIEVADRVLCLAIQPVKPGSGFSVIGNLMQQGYLFEFDVDKSRLGFSRHGCAVR* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00507 435 CDD pepsin_A_like_plant 66 432 IPR034161 -
Rops1g00507 435 PRINTS Pepsin (A1) aspartic protease family signature 404 419 IPR001461 GO:0004190|GO:0006508
Rops1g00507 435 PRINTS Pepsin (A1) aspartic protease family signature 73 93 IPR001461 GO:0004190|GO:0006508
Rops1g00507 435 PRINTS Pepsin (A1) aspartic protease family signature 308 319 IPR001461 GO:0004190|GO:0006508
Rops1g00507 435 PANTHER OS07G0603500 PROTEIN-RELATED 48 432 - -
Rops1g00507 435 SUPERFAMILY Acid proteases 61 432 IPR021109 -
Rops1g00507 435 Pfam Xylanase inhibitor C-terminal 277 428 IPR032799 -
Rops1g00507 435 FunFam Aspartyl protease family protein 258 434 - -
Rops1g00507 435 Gene3D Acid Proteases 252 434 IPR021109 -
Rops1g00507 435 FunFam Aspartyl protease family protein 2 47 251 - -
Rops1g00507 435 Gene3D Acid Proteases 42 251 IPR021109 -
Rops1g00507 435 Pfam Xylanase inhibitor N-terminal 67 252 IPR032861 -
Rops1g00507 435 ProSiteProfiles Peptidase family A1 domain profile. 67 428 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00507 Rops-Chr1 13399285 13400776 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00507 57 432 Miscellaneous Gene Families AT1G77480 26.196 1.77e-24 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00507 K22683 - zju:107407573 602.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g00507 1 13399285 13400776 Rops1g00507 1 13399285 13400776 ECH