Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01197 ATGTTTTTCCCTTCTACTCAATTGAAGAAGCTAGAGAAACGCAAGTTTGATTTTAAAATAGGGTCAAAAGTAAGATTTGTTTTGAGCCTTGTCCATCGTGTTGTGAAGAAGGAGAAGGATGATGCAGAATCTATATGTAAGATGCTCGGCGGTGGTTTGGAACAATCTTGTAAGCCAAGCTTTGGGCAATGTTACTTTTGTGGAGGATCCACAAATTTTAAGATGATTTCTAATGAAATAGATAGTATACATGGGAGAACAGGCTACAGTGACATGCATATAGATGCAAGAAAAAAGGAATGTGCAGCTGCTTTCGTGTTCTTTAAAAGCCGGTATGCTGCCCTTATGGCTGCCCAAAATCTTCAAACATCAAATCCTATGCTATGGGTCACAGACCTAGCTCCTGAACCACGTGATGTTTATTGGGCCAACCTTTGCATACCATACAGGCAACTTTGGATTCGTAAGATAGCTACATTTGCGGCTTCTGTCACCTTCGTGCTTGTTTTCCTTATCCCTGTCACATTCGTACAAGGCATGACTCAACTAGACAAACTTGAGAAAATGTTCCCTTTTCTGGCAGGGATACTTCAAAAGAAATTTACGATTCAGCTGGTGACTGGTTACTTGCCAAGTGCGGTTTTGGTTTTGTTTTTATATGCTGTTCCACCAATGATGATGCTGTTTTCAGCAGTGGAAGGGTCTATTTCCCGTAGTGGAAGGAAGAAAAGTGCATGCTGCAAAGTTTTGTATTTTACAATTTGGAATGTGTTTTTTGTAAATGTTTTAGCCGGGTCTGTTATTAGCCAACTATTAGTTTTTACTAGTATAACAGAACTACCTGCCCAACTTGCCAAGGCCGTCCCACTGCAGGCTACCTTCTTTACAACATATGTTTTATCGTCTGGTTGGGCAAGTTTGGCATTTGAAATCATGCAACTGTTTCCTCTCTTCTGCAATTTGTTCCAGAGATTCGTATTCTGTTCCAATGAAGATACACTGAATGGCAGCCTAACTTTTCCATACCATACAGAAGTTCCAAGGATCCTGCTGTTTGGATTCATTGGGTTCACCTGTTCTATTTTGGCACCCCTAATACTGCCCTTCTTATTGTTTTACTTTTTCCTTGCATACCTCGTTTACCGAAACCAGATTCTCAATGTGTATATTAGAAAATATGATGGTGGGGGACACTTATGGCCCATTGCTCACAACACAACTATCTTTTCATTGCTGGTGGCTCAAGTTATTGCTATTGGTGTATTTGGACTAAAAGGATCAACAGTGGCAACTGGATTTACCATTCCACTGTTGATTGGTACCATTCTATTTCACCAATATTGCAGGCAGCGATTTCTCCCGGTATTTCAGAACAGAGCAGCCCAGGTTCTTATTGACATAGATCGGAGGGATGAACGTTGTGGTAGAATGGAAGCGATTTATGAACAATTGCATTCAGGCTACTGTCAGTTCACTAGTTCTAGTCAATCCGAAGGTTCCAGTCATCAAGAGGACAGGGAGCGTGTTCGGACACCAGAAGATTCGGAGACAGGCAGAGAAATTAGCCAACAAGATATGTCATGGCCAGTTCATCGTAGTTTAGTTTGA 1608 0.4117 MFFPSTQLKKLEKRKFDFKIGSKVRFVLSLVHRVVKKEKDDAESICKMLGGGLEQSCKPSFGQCYFCGGSTNFKMISNEIDSIHGRTGYSDMHIDARKKECAAAFVFFKSRYAALMAAQNLQTSNPMLWVTDLAPEPRDVYWANLCIPYRQLWIRKIATFAASVTFVLVFLIPVTFVQGMTQLDKLEKMFPFLAGILQKKFTIQLVTGYLPSAVLVLFLYAVPPMMMLFSAVEGSISRSGRKKSACCKVLYFTIWNVFFVNVLAGSVISQLLVFTSITELPAQLAKAVPLQATFFTTYVLSSGWASLAFEIMQLFPLFCNLFQRFVFCSNEDTLNGSLTFPYHTEVPRILLFGFIGFTCSILAPLILPFLLFYFFLAYLVYRNQILNVYIRKYDGGGHLWPIAHNTTIFSLLVAQVIAIGVFGLKGSTVATGFTIPLLIGTILFHQYCRQRFLPVFQNRAAQVLIDIDRRDERCGRMEAIYEQLHSGYCQFTSSSQSEGSSHQEDRERVRTPEDSETGREISQQDMSWPVHRSLV* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01197 535 MobiDBLite consensus disorder prediction 492 535 - -
Rops10g01197 535 MobiDBLite consensus disorder prediction 521 535 - -
Rops10g01197 535 MobiDBLite consensus disorder prediction 500 520 - -
Rops10g01197 535 Pfam Calcium-dependent channel, 7TM region, putative phosphate 155 422 IPR003864 GO:0016020
Rops10g01197 535 PANTHER PROBABLE MEMBRANE PROTEIN DUF221-RELATED 73 498 IPR045122 GO:0005227
Rops10g01197 535 Pfam Cytosolic domain of 10TM putative phosphate transporter 47 144 IPR027815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01197 Rops-Chr10 24386038 24391638 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01197 K21989 - gmx:100789875 804.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01197 10 24386038 24391638 Rops10g01197 10 24386038 24391638 ECH
Rops9g02100 9 38584543 38595361 Rops10g01197 10 24386038 24391638 PCT