Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01193 ATGAAGGAGGACGCAGACAAAGATAAAAGCGCAGACGCGAAGCTTTGGGGAGTCTTCCTCTTCGGTTTGATTGGCGCCACCGCCACTACCTTCGCGGTCGGTCAGCTGCGGAGGACTGTTGATTGGTTCAGTGCTCAGCTGTCGAGGACGAAATCATCATGGAAAGGAGGAAGTGGTGGTACTTTCAGATCATCTTTCCAGGAAGAGGCATGGAGGAGGCACAATAAGCGACTGCAAGAGGAGTATGAGGAGGAGATGGAGAGAGTGGAAAGAATTAGGCGGATGCAAAGTGTGTTTAACAGAGAAAGGAATAAGTACAAAAGATGCTATGAAAGCTGGAGGGAAAATGGTCCTGGTGCATATCATCAGCATTTCCAAAGAGAAGATTGGTATTGGAAGACAGATACATCCTTCAGAGACAGGAGGGCTAATTATCGAGAAACTCCAAGACAGAGTGGCAACTATGCATTATCACATCACTACTCTGTCTTGGGTCTGGACAGGTTTAGAAAAATGCCATATTCAGATGCTGAGATTAAGACAGCCTTTAGGGCCAAGGCAAAGGAGTATCATCCTGATCAGAACCAGGATAATATAGAGGCTGCTGAGGCTAAGTTCAAAGAAGTGATGACTTCATACGAGGCCATAAACCAGGAAAGAAGGAACCAAAATCCGTAA 678 0.4617 MKEDADKDKSADAKLWGVFLFGLIGATATTFAVGQLRRTVDWFSAQLSRTKSSWKGGSGGTFRSSFQEEAWRRHNKRLQEEYEEEMERVERIRRMQSVFNRERNKYKRCYESWRENGPGAYHQHFQREDWYWKTDTSFRDRRANYRETPRQSGNYALSHHYSVLGLDRFRKMPYSDAEIKTAFRAKAKEYHPDQNQDNIEAAEAKFKEVMTSYEAINQERRNQNP* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01193 225 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 5 223 - -
Rops10g01193 225 Pfam DnaJ domain 160 221 IPR001623 -
Rops10g01193 225 Coils Coil 68 95 - -
Rops10g01193 225 CDD DnaJ 160 214 IPR001623 -
Rops10g01193 225 SMART dnaj_3 158 221 IPR001623 -
Rops10g01193 225 Gene3D DnaJ domain 140 224 IPR036869 -
Rops10g01193 225 PRINTS DnaJ domain signature 183 198 IPR001623 -
Rops10g01193 225 PRINTS DnaJ domain signature 201 221 IPR001623 -
Rops10g01193 225 ProSiteProfiles dnaJ domain profile. 159 221 IPR001623 -
Rops10g01193 225 Coils Coil 199 219 - -
Rops10g01193 225 SUPERFAMILY Chaperone J-domain 156 220 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01193 Rops-Chr10 24302424 24305651 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01193 - - gmx:100812371 368.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01193 10 24302424 24305651 Rops10g01193 10 24302424 24305651 ECH
Rops9g02102 9 38618837 38629499 Rops10g01193 10 24302424 24305651 PCT