Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2520 ATGAAAGTGTGCGTTGCTGCGGCTGCGGCCGTCACTCTGTTTGCGGCGTGGCTGATTCTCGTCGACGCGCGGTTTGTGGTGGAGAAGAGCAGCATAGCCGTTCTTTCGCCGCACAAGATGCGGACGAAACGCGACGGCGCTATCGGTAACTTCGGCCTTCCTGACTACGGAGGATTCATCGTTGGCTCTGTGATGTATCCCGCCAAAGGCTCCCACGGTTGTAAGGTCTTCGACGGAGACAAGCCTTTCAAACTTCAGTCCCATCGTCCTACTATTGTTCTCCTTGATCGCGGAGAGTGTTATTTTGCCTTGAAGGTTTGGCATGCACAATTAGCTGGTGCTGCGGCAGTTTTGGTGACCGACAGCATTGATGAATCTCTTATAACCATGGATTCTCCGGAGGAGAGCTCTGATGCAGATGGATACATAGAGAAGATTGTGATTCCATCAGCTCTGATAGAGAAATCCTTTGGTGATTTGTTGAAGGACGCTTTGAATAACAAAGATGAAGTTTTGCTGAGAATTGACTGGAGAGAGTCCGTACCTCACCCTGATAACAGAGTTGAGTATGAGTTTTGGACCAACAGCAATGATGAATGTGGAGCTCGTTGCGACGAGCAGATGAGTTTCGTGAAGAATTTTAAGGGTCATGCTCAGATTCTTGAGAGGGGAGGTTACACCTTGTTCACTCCACACTATATAACTTGGTTTTGTCCACCGCCCTTCATTCTTAGCAGTCAGTGTAAATCGCAGTGTATAAACCATGGGAGATATTGTGCCCCGGACCCAGAGAAGGATTTTGGAGAGGGCTATGAAGGAAAGGATGTGGTGTATGAAAATTTGAGGCAGCTGTGTGTCCATAGGGTTGCCAATGAGAGCAACCGTTCATGGGTCTGGTGGGATTATGTGACAGATTTCCATGTCAGATGTTCTATGAAGGAGAAAAGATACAGCAAAGATTGTGCTGAGGAAGTGATGAAATCATTGGATCTGCCTTTGGAGAAAATTAAAAAATGCATGGGTGATCCTGAAGCGGATGTGGAGAATGAAGTGCTAAAGAATGAGCAACAAGTCCAGATCGGTAGGGGATCTCGGGGTGATATCACCATCTTGCCAACATTGGTTTTAAACAATGTCCAGTATAGAGGAAAATTGGAGAGAACTGCTGTACTGAAGGCTGTATGTTCTGGATTTAAGGAGACTACTGAACCTTCAGTTTGTTTAAGTGGAGATGTTGAGACTAATGAGTGTCTTGAAAGAAATGGAGGATGCTGGGAAGACAAAAAAGCTAACATAAGTGCTTGCAAGGATACATTCAGGGGAAGAGTTTGCGAGTGCCCTGTTGTGAACGGTGTTCAGTATAAGGGTGATGGTTATACTACTTGTGAAGCTTTTGGACCTGCAAGGTGTTCTATAAACAATGGTGGTTGTTGGTCAGAAACTAAAAAAGGACTAACTTTCTCAGCTTGCTCAGACTCCAAGGCAAATGGCTGTCAATGCCCGGTTGGGTTTATTGGGGATGGTAATAAATGCGAAGATGTTGACGAATGTAAGGAACGAAGTGCTTGTCAGTGTGATGGCTGCAGCTGCAAGAACACTTGGGGTAGTTACGATTGTAAATGCAAGGGAAATCTTCTATACATAAAGGAACAAGACGTCTGTATTGAAAGAAATGGATCACGATTTGGCCGGTTCCTTGCCTTTGTGGTCATAGCAGTTGTTGTGGGCGCTGGTCTAGCTGGTTACGTGTTCTACAAATATAGGCTCCGGTCTTACATGGACTCTGAGATCATGGCAATCATGTCACAGTACATGCCACTGGACCAGCAAAATAATGTAGTGCATGCTGAAGCTCAGCCTTTACGACAAGAAGGCACCGTGTAA 1884 0.4575 MKVCVAAAAAVTLFAAWLILVDARFVVEKSSIAVLSPHKMRTKRDGAIGNFGLPDYGGFIVGSVMYPAKGSHGCKVFDGDKPFKLQSHRPTIVLLDRGECYFALKVWHAQLAGAAAVLVTDSIDESLITMDSPEESSDADGYIEKIVIPSALIEKSFGDLLKDALNNKDEVLLRIDWRESVPHPDNRVEYEFWTNSNDECGARCDEQMSFVKNFKGHAQILERGGYTLFTPHYITWFCPPPFILSSQCKSQCINHGRYCAPDPEKDFGEGYEGKDVVYENLRQLCVHRVANESNRSWVWWDYVTDFHVRCSMKEKRYSKDCAEEVMKSLDLPLEKIKKCMGDPEADVENEVLKNEQQVQIGRGSRGDITILPTLVLNNVQYRGKLERTAVLKAVCSGFKETTEPSVCLSGDVETNECLERNGGCWEDKKANISACKDTFRGRVCECPVVNGVQYKGDGYTTCEAFGPARCSINNGGCWSETKKGLTFSACSDSKANGCQCPVGFIGDGNKCEDVDECKERSACQCDGCSCKNTWGSYDCKCKGNLLYIKEQDVCIERNGSRFGRFLAFVVIAVVVGAGLAGYVFYKYRLRSYMDSEIMAIMSQYMPLDQQNNVVHAEAQPLRQEGTV* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2520 627 Gene3D Laminin 468 556 - -
Pvu9g2520 627 Gene3D Laminin 407 463 - -
Pvu9g2520 627 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 16 603 - -
Pvu9g2520 627 PANTHER EGF-LIKE CALCIUM-BINDING DOMAIN, PA DOMAIN-CONTAINING PROTEIN-RELATED 16 603 - -
Pvu9g2520 627 Pfam PA domain 62 161 IPR003137 -
Pvu9g2520 627 ProSitePatterns Calcium-binding EGF-like domain signature. 513 539 IPR018097 GO:0005509
Pvu9g2520 627 SUPERFAMILY PA domain 91 171 IPR046450 -
Pvu9g2520 627 CDD EGF_CA 513 542 - -
Pvu9g2520 627 SMART egfca_6 513 555 IPR001881 GO:0005509
Pvu9g2520 627 Gene3D - 22 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2520 Pvu-Chr9 35690906 35697150 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2520 5 624 Miscellaneous Gene Families AT1G30900 70.465 0.0 964
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2520 - - pvu:PHAVU_009G243800g 1300.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2520 9 35690906 35697150 Pvu9g2520 9 35690906 35697150 ECH