Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0765 ATGTTGGACACCTACGTGTTTGGATGGATCATATGCGCCGCGCTGAGCGTATTTGTGATTCGCAATTTCGTTTTCGCGGGGAAGAAATGTTGCGCATCGTCGGAGACCGATGCCTCTATGTGCGCCGAAAACATCACTACTGCCGCCGGAGAATGCAGATCGTCGATGCGCGACGGCGAATTTGACGTCTTAATTGTCGGAGCTGGCGTCGCTGGCTCCGCTCTGGCTTACACTCTCGGCAAGGATGGACGTCAAGTACTTGTCATTGAAAGAGATCTGAGTGAACCAGACAGAATTGTTGGAGAGTTGCTTCAGCCTGGAGGCTATCTGAAGTTAATTGAGCTGGGACTTGAAGATTGTGTGGATAAAATTGATGCTCAACAAGTGTTTGGTTATGCTCTTTTCAAGGATGGGAAACACATTAGACTCTCTTATCCGTTGGAAAAGTTTCACTCAGACGTTGCTGGCAGAAGCTTTCACAATGGCCGTTTTATTCAAAGGATGAGAGAGAAGGCTGCCTCCCTTCCCAATGTACGACTAGAGCAAGGAACAGTTACTTCCTTACTTGAAGAGAAGGGGGTAATTAAAGGCGTGCAATACAAAACTAAGGATAGTCAAGAATTATCAGTTTGTGCACCCTTTACCATTGTTTGTGATGGCTGTTTTTCAAACTTGCGTCGTTCTCTTTGTGATCCTAAGGTAGATGTGCCCTCTTGTTTCGTTGGTCTAGTTTTGGAGAATTGTGAACTTCCTTGTGCAAATCATGGCCATGTCATACTGGGAGAACCTTCGCCAGTTCTGTTTTATCCAATAAGTAGTACAGAAATCCGTTGTCTGGTTGATGTTCCTGGTCAGAAAGTTCCGTCTATTTCTAATGGTGAGATGGCTAAGTATTTGAAGACAGTGATAGCTCCACAGGTTCCGCATGAGCTTCATAACGCATTCATAGCTGCAGTGGACAAAGGCAGCATCAGGACAATGCCAAACAGAAGCATGCCAGCAGCTCCTTATCCTACTCCCGGAGCCCTGTTGATGGGAGATGCATTCAATATGCGCCATCCTCTAACGGGGGGTGGCATGACTGTGGCATTATCTGATATAGTAGTGCTGCGAAATCTTCTTAGGCCTTTGCGTGATCTGAATGATGCACCCAGCCTTTGCAAATACCTTGAATCCTTTTATACCTTGCGAAAACCTGTGGCGTCCACTATAAATACGCTGGCAGGAGCTCTTTACAAGGTTTTTTGTGCATCATCTGATCCTGCGAGGAAGGAAATGCGCCAAGCTTGCTTCGATTATCTTAGTCTTGGAGGTCAATTCTCGGAAGGGCCAATCTCTCTGCTTTCGGGATTAAATCCTCGGCCGTTGACCCTGGTTCTCCATTTCTTCGCTGTTGCAACATATGGGGTCGGCCGTTTACTGCTACCATTTCCTTCACCTAAACGGATGTGGATTGGACTTCGGTTAATTTCTAGCGCATCCGGAATCATCATGCCAATAATTAAGGCAGAAGGAGTCCGTCAGATGTTCTTCCCTGCAACCGTTCCAGCTTACTACCGAAATCCCCCGGCTGCTTAA 1578 0.467 MLDTYVFGWIICAALSVFVIRNFVFAGKKCCASSETDASMCAENITTAAGECRSSMRDGEFDVLIVGAGVAGSALAYTLGKDGRQVLVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVDKIDAQQVFGYALFKDGKHIRLSYPLEKFHSDVAGRSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEEKGVIKGVQYKTKDSQELSVCAPFTIVCDGCFSNLRRSLCDPKVDVPSCFVGLVLENCELPCANHGHVILGEPSPVLFYPISSTEIRCLVDVPGQKVPSISNGEMAKYLKTVIAPQVPHELHNAFIAAVDKGSIRTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLRPLRDLNDAPSLCKYLESFYTLRKPVASTINTLAGALYKVFCASSDPARKEMRQACFDYLSLGGQFSEGPISLLSGLNPRPLTLVLHFFAVATYGVGRLLLPFPSPKRMWIGLRLISSASGIIMPIIKAEGVRQMFFPATVPAYYRNPPAA* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0765 525 PANTHER SQUALENE MONOOXYGENASE 1 524 IPR040125 GO:0004506|GO:0016126
Pvu9g0765 525 Pfam Squalene epoxidase 212 484 IPR013698 GO:0004506|GO:0016021|GO:0050660
Pvu9g0765 525 Gene3D - 55 434 IPR036188 -
Pvu9g0765 525 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 62 84 - -
Pvu9g0765 525 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 211 226 - -
Pvu9g0765 525 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 339 354 - -
Pvu9g0765 525 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 354 370 - -
Pvu9g0765 525 PANTHER SQUALENE MONOOXYGENASE-RELATED 1 524 - -
Pvu9g0765 525 Pfam NAD(P)-binding Rossmann-like domain 65 91 - -
Pvu9g0765 525 SUPERFAMILY FAD/NAD(P)-binding domain 60 435 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0765 Pvu-Chr9 12316917 12321119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0765 58 523 Miscellaneous Gene Families AT1G58440 80.687 0.0 794
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0765 K00511 - gmx:100820031 933.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0765 9 12316917 12321119 Pvu9g0765 9 12316917 12321119 ECH
Pvu1g0321 1 2985079 2989796 Pvu9g0765 9 12316917 12321119 PCT