Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0360 ATGGCCGCGTCGCCCTCCTCCTCCACCGCGGCCTCCGCCAACATCGTGCTCGCGATCTTCGAGAAGAAGACCAACACCGTCGATCTGTATCGGCCACTACGCAATTACGTGGCGTTTCACTACTCCGAGCGCGAAGCGCAGAACCTCGAAGACGATCTCCAAACCCTAAAGCAACTGCGCTCCGACCTCGAACGTCACACCGATCCGTCCCTACCGGCGCGCCGCGATCTCCTCCAAACCTACTTCAAATCTCTTTGCCTTGTTGAGACGCGCTTCCCAATCTCCCCCGACCCTGGCCACGTCAACGCCCTCACCTTTGTCTGGTTCGATGCCTTCAAGCCAAAGCAGAAGGCCTCGCAGCAGAACATTCACCTCGAGAAGGCCTCCGTGCTCTTCAATATGGGCGCCGTTTACAGTCAGATTGGATGTTCCTACGATCGCAACACCGTTGACGGCCGCCGCCAGGCCTCGCATGCCTTCATTGCTGCTGCCGGTTCCTTTGCCTTCCTCCGCGACAACGCCTCCATGAAGGCGTCCGTTGGGAACTCCACCACCGTTGATTTGTCCGTTGAGTGTGCCGGGATGCTGGAGAAGCTCATGCTCGCGCAGGCGCAAGAGTGCGTCTTCGAGAACACCATTGCTAAAGGGAGCACTCCCGGTGTCTGTGCCAAGATCTCCAGACAGGTTGGGATATATTACGAGGAAGCTTTAGCTGCGCTGAATGTTGCACCTTTGAGCCAGCATTTTGAAAAGTCCTGGATAGTTCATGTACAGTTAAAGGCGGCACTGTTCTATGCAGAAGCTTGTTATAGGTATGGATTGGAGCTGCATGATAAAGAGGAAATAGCTGAGGAGATTGCACGACTGCGGAGTGCTGTTAATGTGTTGACTGAGGCGAAGAAGAGCTCTAAGGGTGCTGCGGTGCAAATTCTTGATGCAATTGGCAAGTTAGAGGCCAATATTAACCGGAACCTTGAAAGAGCTGTCAAGGAGAATGATAGGGTTTATCTCATGAGAGTTCCTCCGCCAAGTTCATTATCGCCCCTTCCAGCATTTTCTATGGTGAAGCCCATGGCAATGAATGAGGTGCTGGATGCAAGCAAAGAGAAGATGTTTGCGAGTCTTGTTCCGGACAGCAGTGCAAAGGCCCTCTCCCGCTATACTGAAATGGTAGATGATGTTATAAGAACACAGGCTGAAAAGTTGCAGCAAGCTAGTGAGCTAACCCGAGTTAGGCTTAAGGAAATGGAACTTCCGGATTCCATTCTTGCTTTGGAAGGGAATTTTACTCTTCCAACAGGTCTCAAAGAAGATGTGGAGGCTGTGCAGATCAGTGGGGGCCCTGCTGGTTTGGAAGCAGAGTTGCAGCAACTTAAGGACCTAAGGAGGGTGAATCAAGAGTTGCTGGTCCAGACTGAGGAATTGTTGCAGAAGGAAGCAAGAGAAGATTCTCAATTTAGAAGTCAATTTGGCACAAAATGGACCAGGCCCCAGTCAAGCACCTTGACTAAAAACTTGCAGGATAGGCTCAACAGGTTTGCAGGTAACTTGAAGCAAGCTGCTGAAAGTGATGGCAGGATTGAGCGATCAGTTAGAGAACATTCAGCACTCATGTCAATCCTTGATGCCCGTCCGATTGAATCTGCCCTTCCAAGCTTGGCAAGGCCGATTATGTCTTTTGATCAAAATGAAGATGCTATTGTGGGGTCTCTCAAGCAAAGTTTGAGGCAACTAGAAATTCTAGGAGCTCAAAGGGCTGGTCTTGAAGATATGCTTAAAGATATGAAAAGAAAGGATGATATATTACCAAAGTTGATGACTTCCACCGGTTCTTACGATGATCTCTTCAAGAAGGAGCTAGCAAAATATGACCATATTTGTGATGAAATAGCTCAAAATATTGAGGCACAGGAGCAATTATTGCTGCAGATCCAGGCTCAAAATGATGAGTTCTCTGTTATCTTCAATCTTGAAGATTACAAAGCTTCACGTGAGAAAGCCTACAAGCAGATTGAAGCCTCCATAGCGAAATTTCGAGAGATAAAAGAAAACATCAATGAAGGGTTAAAATTCTATGTAACCCTGCAGGATGCAATCACAAACGTAAAGCAGCAGAGCAACGACTTTGTAATGACAAGGAACATTCAGTGCAGGGAAATGATTGATGATGTTCAGAGACAAGTGGCTGGTCTAAGTTTCCAGGACAAAAACACAGGTACTTTTAACAGCAACTACCCATCAGTGGGAAGCCAAAATCAAAGAGCCAGTACACAAACAGATCCTCGTCCACAAGCACCTTATTATCAGCCAGTTGAGCAGCCACCAGTTGCTCCCTATGGTCATCATGCACCTCCCCAATATGGTGGTCCTGCACATCATCAGCCTCCACCTCCATACCACATTCCACCATCATCAACTGCTCCATACCCACCCGCTCAGGTTCACCAGCAGCCACCGGGAAACCATGAGTATGGCCAGCCAGCATATCCAGGATGGCGTGGTCCTTACTATAATGCGCCAGCACAGCAACCTGGTTCTGTGCCGCGGCCTCCTTATACCATTCCATCTCCATATCCTCCGCCTCACCAAAGTGGTTACTATAAGCAGCAATAG 2613 0.4891 MAASPSSSTAASANIVLAIFEKKTNTVDLYRPLRNYVAFHYSEREAQNLEDDLQTLKQLRSDLERHTDPSLPARRDLLQTYFKSLCLVETRFPISPDPGHVNALTFVWFDAFKPKQKASQQNIHLEKASVLFNMGAVYSQIGCSYDRNTVDGRRQASHAFIAAAGSFAFLRDNASMKASVGNSTTVDLSVECAGMLEKLMLAQAQECVFENTIAKGSTPGVCAKISRQVGIYYEEALAALNVAPLSQHFEKSWIVHVQLKAALFYAEACYRYGLELHDKEEIAEEIARLRSAVNVLTEAKKSSKGAAVQILDAIGKLEANINRNLERAVKENDRVYLMRVPPPSSLSPLPAFSMVKPMAMNEVLDASKEKMFASLVPDSSAKALSRYTEMVDDVIRTQAEKLQQASELTRVRLKEMELPDSILALEGNFTLPTGLKEDVEAVQISGGPAGLEAELQQLKDLRRVNQELLVQTEELLQKEAREDSQFRSQFGTKWTRPQSSTLTKNLQDRLNRFAGNLKQAAESDGRIERSVREHSALMSILDARPIESALPSLARPIMSFDQNEDAIVGSLKQSLRQLEILGAQRAGLEDMLKDMKRKDDILPKLMTSTGSYDDLFKKELAKYDHICDEIAQNIEAQEQLLLQIQAQNDEFSVIFNLEDYKASREKAYKQIEASIAKFREIKENINEGLKFYVTLQDAITNVKQQSNDFVMTRNIQCREMIDDVQRQVAGLSFQDKNTGTFNSNYPSVGSQNQRASTQTDPRPQAPYYQPVEQPPVAPYGHHAPPQYGGPAHHQPPPPYHIPPSSTAPYPPAQVHQQPPGNHEYGQPAYPGWRGPYYNAPAQQPGSVPRPPYTIPSPYPPPHQSGYYKQQ* 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0360 870 CDD BRO1_Alix_like_1 16 371 - -
Pvu7g0360 870 Gene3D alix/aip1 like domains 423 704 - -
Pvu7g0360 870 CDD V_Alix_like_1 377 713 - -
Pvu7g0360 870 SMART BRO1_2 15 399 IPR004328 -
Pvu7g0360 870 Coils Coil 279 299 - -
Pvu7g0360 870 ProSiteProfiles BRO1 domain profile. 15 409 IPR004328 -
Pvu7g0360 870 Gene3D alix/aip1 in complex with the ypdl late domain 377 655 - -
Pvu7g0360 870 Coils Coil 39 66 - -
Pvu7g0360 870 MobiDBLite consensus disorder prediction 735 870 - -
Pvu7g0360 870 PANTHER PROGRAMMED CELL DEATH 6-INTERACTING PROTEIN-LIKE 4 859 - -
Pvu7g0360 870 Coils Coil 578 598 - -
Pvu7g0360 870 MobiDBLite consensus disorder prediction 735 764 - -
Pvu7g0360 870 MobiDBLite consensus disorder prediction 767 781 - -
Pvu7g0360 870 Pfam ALIX V-shaped domain binding to HIV 431 715 IPR025304 GO:0005515
Pvu7g0360 870 Coils Coil 627 647 - -
Pvu7g0360 870 Gene3D alix/aip1 like domains 12 376 IPR038499 -
Pvu7g0360 870 PANTHER PCD6 INTERACTING PROTEIN-RELATED 4 859 IPR045251 GO:0071985
Pvu7g0360 870 MobiDBLite consensus disorder prediction 789 815 - -
Pvu7g0360 870 Coils Coil 451 478 - -
Pvu7g0360 870 MobiDBLite consensus disorder prediction 844 862 - -
Pvu7g0360 870 Pfam BRO1-like domain 17 394 IPR004328 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0360 7 2832561 2840785 Pvu7g0360 7 2832561 2840785 ECH