Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0478 ATGGGTAAGAAAGCAGTGCTAATAGGATGCAATTACCCAGGAACAAAGGCTGAATTGAGAGGGTGCATCAATGATGTGTGGAGTATGAAGAAGTGCCTCATCAACATATATGGTTTCTCAGAAAAGGACATTGTTGTTCTCATTGACACTCATCATTCCTACACCCAACCCACCGGCAAGAACATCAGATTCGCTCTGTCCAAGCTTGTCCGGTCGGCCAAGTCTGGCGACGTCCTCTTCGTCCACTACAGCGGCCACGGCACCCGTCTTCCGGCGGAGTCCGACGACCAAGACAACACTGGCTACGATGAATGCATTGTTCCCACAGATATGAATCTCATCGCTGATGATGATTTCAGACTACTAGTAGACAAGGTCCCAAGGGGTTGTAATATCACAATCGTTTCAGATTGCTGCCACAGTGGTGGCCTTATTGAAGCAGCAAAGGAACAAATAGGAGACAGCACCAACCAAGAAGGCTACTTTTCAAATTCTCCATTTCACTTCGGAAACTTCCTTCATCGAAACATGCAAAAGGAAGAAGAAGAAGAAGAAACCACTGTGAAGAACCGATCTTTGCCTCTCTCAACTCTCACAGACATACTCCAGCAGAAGAGTGGTAAAGACATAGAAACTGGGAAACTAAGTTATACCCTCTTCCACATCTTTGGTGAAGATGCAAGCCCCAAACTGAAGAAGTTCTCAGATTTAGTCATGAACAAACTCCAACATGGAAAAAGTGGTGAGAGTGGAGGGCACAGAGTTGGGGGTGTGGGTGATCTTGCTCACAAATTCTTTGAACAGAAGCTACATTATGATGGTGATGAGGTAGAAAAACGTGGGGGAAACAGAAAAGGGGAACATGCTGCATCAATCAAGCGCAATGTTTTGGATTGTGGGATTCTGCTGAGTGGTTGCCAGAGTGACCAAACTTCTGCAGATGCATGTCCTGTTGGAAAGTCTGGGTCAGCTTACGGGGCCTTCAGCAATGTGATTAAGGGTATAATTGAAGAGAGTGAAGGGGCAGTGACAAACCGGGATCTTGTGCTGAAGGCTAGAATGATCCTTAAGAAGCAGGGTTTTTCTCAGAAACCTGGTCTGTATTGCAGTGACAACAATGTTAATGCTCCCTTTGTGTGTTGA 1143 0.4576 MGKKAVLIGCNYPGTKAELRGCINDVWSMKKCLINIYGFSEKDIVVLIDTHHSYTQPTGKNIRFALSKLVRSAKSGDVLFVHYSGHGTRLPAESDDQDNTGYDECIVPTDMNLIADDDFRLLVDKVPRGCNITIVSDCCHSGGLIEAAKEQIGDSTNQEGYFSNSPFHFGNFLHRNMQKEEEEEETTVKNRSLPLSTLTDILQQKSGKDIETGKLSYTLFHIFGEDASPKLKKFSDLVMNKLQHGKSGESGGHRVGGVGDLAHKFFEQKLHYDGDEVEKRGGNRKGEHAASIKRNVLDCGILLSGCQSDQTSADACPVGKSGSAYGAFSNVIKGIIEESEGAVTNRDLVLKARMILKKQGFSQKPGLYCSDNNVNAPFVC* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0478 380 PANTHER METACASPASE-4 181 380 - -
Pvu5g0478 380 PANTHER METACASPASE-4 1 164 - -
Pvu5g0478 380 PANTHER METACASPASE-5 1 164 - -
Pvu5g0478 380 PANTHER METACASPASE-5 181 380 - -
Pvu5g0478 380 Pfam Caspase domain 3 375 - -
Pvu5g0478 380 SUPERFAMILY Caspase-like 5 113 IPR029030 -
Pvu5g0478 380 Gene3D - 254 379 - -
Pvu5g0478 380 Gene3D - 1 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0478 Pvu-Chr5 4989199 4991987 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0478 5 4989199 4991987 Pvu5g0478 5 4989199 4991987 ECH
Pvu5g0478 5 4989199 4991987 Pvu11g1873 11 45594182 45597318 PCT