Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0474 ATGCCTCTCTTCCTCTCCGATGAGGAGTTCTCGCGGTGCTCCGGTGACGGCGCCGCCGTGGCCGCGAAGGCCGACGCTTTTATCCGCGGCCTCCTACACGAGCTCGACACCGTCCGTGCCAAGGCCGACGCCGCTGACATCAACGCCGAGCAGAACTGTTCCCTCATCGAGCAGAAATACCTTTCCCTCGCCGCCGAGTTCTCCAAGTTGGAGTCCAACGTCGCTGACCTCCAATCTTCCCTTGATCAGCGCCTCCGCGAACTCGCCGAGACGCAATCGCAGAACCACCAAATTCAATTGCAATCGGTTGAGAAAAATAGGGAGATAGAGCGGTTGAGGATGGAGGTGGGGGAGTTGCACAAGTCAAAGAGGCAGTTGATTGAGTTGAACGAGCAGAAGGATTTGGAGCTTAGTGAGAAGAATGCAACCATGAAGAGTTATCTTGATAAGATTGTCCATTTAAGTGAAAATGCTGCTCATAAGGAGGCTCGATTGAGTGAAGTTGAGGCAGAATTAGCGCGGTGCCGGGCTGCTTGCAGTCGCCTTGAACAGGAGAAGGAGATTATTGAGAAACAGAATTCTTGGCTGAACGAGGAGTTGAATGGTAAAGTTAACAGTGTTTTTGAGCTACGCAGAAAGAACGCAGATTTGGAAGCTGATATATCTTCCAAGCTTGCAGATATGGAGAGACAATTCAACCAATGTTCTCAATCTCTACAGTGGAATAAGGATAGAGTGAGGGAGCTTGAAATGAAGCTTAAATCTGTGCAAGAGGAATTAATTTCAGCTAAAGATGCTGCAGCAGTCAATGAAGAACAATTATCTGCTGAACTCTCCACTGTTAATAAGCTTAATGAGCTATATAAAGAGAGTTCCAAGGAATTGTCAAAAAAGACAACAGACCTAGAGGGTGTGATAAAAGCGTTGGAGTCAGACTTAAAGCAAGTTGAGGATCATTATAAAGGGAAACTTGAGAAGGAATTATCTGCCAGAAAACAGGTTGAAAAGGAGGTCACTGATTTAAAAGAAAAGCTTGAGAAGTGTGAAGCTGAAAGTGAGGCAAGGAAGAAGACAAATGAACTGAACAATCTTCCTCTTAGCAGTTTCACTACTGAATCGTGGATTGAATCAATTGAAGCCGATAGCATGGTGGAGGAAAATAGTTTAGTAGTTCCAAAAATTCCTGTTGGAGTTTCTGGAACTGCATTGGCTGCTTCACTTCTTCGAGATGGCTGGAGTTTAGCCAAAATGTATTCAAAATACCAAGAGGCGGTTGATGCATTGAGGCATGAACAATTGGGAAGGAAGGAGTCAGAGGCAGTACTCCAACGGGTTCTCTATGAGTTAGAGGAGAAAGCAGAAGCAATTATTGATGAAAGAGAGGAACATGAAAAGATGGCTGATGCATACTCCTCGATGAGCCAAAAGTTGCAAAACTCCCTGAATGAAAATTCCAACTATGAGAAAACCATTCAGGAACTGAAGGCTGATCTAAAAAGGCATGAACGTGATTATAATCTTGTCCTGAAAGAAACTGACGACCTTCGGAAACAGGTGACAGTACTTTTAAAGGAATGTCGAGACATTCAACTTCGTTGTGGCTCAATGGGGTATGATAATGTGGATGATTCTTCAAATATTGCTTCAAGGACAAGTACAGAGACTGAAGCTGAGCATGTCATATCAGAGCACCTCTTGACTTTTAAGGACATTAATGGACTAGTTGAGCAGAATGTCCAACTTAGAAGCCTTGTACGTAGTCTTTCTGGCCAGATTGAAAATCAGGAGGTGGAATTCAAGGAGAAGCTTGAAATGGAACTCAAAAAACATACTGAAGAAGCTGCTTCTAAAGTTGCAGCTGTTCTGCAGAGAGCAGAGGAGCAAGGGCAAATGATTGAGGCGCTTCATGCATCTGTCTCCATGTACAAAAGGTTGTATGAGGAGGAGCATAATCTTCATTTATCTCAAAGCCATTCTTCAGAAACACGTGCAGAAGTTGGAAGAAACACCCTCAAGACTTCAATTGAAAGTTCTCAGGAGGCTGCAAAGAAGTCCTTGGAAAAATCTGCTGAGCGTGTGAGATGCCTTGAGGATGATTTAGCAAAGTCAAGGAGTAAGATTATTTTATTACAATCAGAACGTGAAAAGATGGCACTTGAAGCGAATTTTTCTAGAGAAAGACTTGATAGCTTTATGAAAGAATTTGAGCATCAGAAAGCTGAAGCAAAAGCCATTTTAGAAAGAAACATAGAGTTTTCTCAGCTGGTTGTTGACTACCAACGAAAGTTGCGTGAAAGCTCTGAGTCATTGATTGCTGCTGAGGAGCTTGCCAGGAAACTTACTATGGAGATGTCAGTTTTAAAACAAGAAAAGGAAATAATATCAAATGCTGAAAAAAGAGCTTCTGATGAGGTTCGCAGCTTGTCTGAAAGAGTGCAGCGTCTGCAGGCTAGTTTGGGTACCATACAAAGTACCGAGGAAGTTCGAGAGGAAGCAAGGGCTGCAGAGAGGGTTAAGCAAGAAGAATATATAAGGAAATTGGAGAAGGAATGGGCTGAAGCCAAGCAAGAGCTAAATGAAGAGCGAGAAAGTGTGCGGAGATTCACACTAGATCGGGACCAGACCATAAAAAATTCTCTGAGACAGGTTGAGGATATGAACAAAGAGTTAGCTAATGCATTGCGTGCAGTTGCATCTGCTGAATCGAGGGCTGCTGTTGCTGAGGCAAAACTCTCCAGTCTGCAAAGAAAACTGGGTTCCACAGATGACAAGCTTGTCTCAATGGGTGGAGAGAGTGGACCTTCCACTTTGTCAAGTGATGAGGTTGTTACTGAATTGGAAAAGGCAAAGGAGGAAATAGAAAAGTTTAAAGAGGAAGCACATGCCAACAAAGTTCACATGCTTCAGTATAAGAGCATTGCGGAGGTGAATGAAGATGCATTGAAACAGATAGAAATGGCACATGAGAAGTTTAAAACAGAGGCTGAAGATTCAAAGAAAGTTCTAGAATCTGAACTTAATTCACTTAGAGAGAAGATGTTAGAGATTGAAAATGAATCTAGTTTGAAGTATGAAGAAGTTGCTTCTGAAACTGTGGGAAAGGAAGAGGCTCTTACATCTGCTATGGCTGAAATCACAAATCTTAAAGAAGAAATTTTAACCAAATCTTCTCAAATTTCAGCATTGGAAATTCAGCTATCGGGTTTAAAGGAAAACCTGGACATGGAGCATCAGAAGTGGCGGGCTGCTCAAACTAATTATGAAAGACAGGTTGTTCTCCAGTCTGAAACGATTCAGGAGTTGACTAAAACATCTGAAGCACTATCCTTGCTGCAGGAGGAGGCATCTGAATTACGGAAACTAACCAATACTCAGAAAGTTGAAAATAATGAACTGAAGGCTAGGTGGGAAGAGGACAAGGCACAATTAGAGAAGTCTAGGAATGATGCTGAAAAGAAATACAATGAAATCAATGAACAGAATAAAATATTACACAGTCAACTTGAGGCTTTTCATATTCGGTGGGCTGAGAAGGAGCGTAATGCTGCTGGTATTTCATCTGGAAGTAGTACTGCAGATGCCTTTGGTGACGGTGGCCTTCAAAATGTCATTAATTATCTCAGACGATCAAAAGAAATAGCAGAAACAGAAGTTTCATTGTTAAAACAAGAGAAGCTGCGGTTACAGTCACAGCTTGAGAGTGCCTTGAAGGCAGCGGAGTCTGCACATGCAACACTAGAATCTGAGCGTGCAAAATCAAAATCATTTTTGTTTTCCGAAGAAGAGTTCAAATCGCTGCAGCTTCAGGTCAGAGAAATGAACTTACTTCGTGAGAGTAACATGCAGCTAAGGGAAGAAAATAAACACAATTTTGAGGAGTGTCAGAAATTGCGCGAAGTAGCACAAAAGGCTAGAACCGAGACAGATAACCTTGAGAATGTCCTTAGGGAAAGAGAAATTGAGCTTGAAGGCTGTAAAAAGGAAATTGAAACGCTAAAATTGGAAAAAGATAATCTCAATAACAAGGTTTTGGAGTTGCTTGAAAGGAGTAAACATGTTGATGTTGAGGATTATGATCGAGTGAAGAAACTTGCTAGAGAACTTCAGGATAAACTAAGAGATAGGGATGCTCGGATTGAGGAAATGAGTAAAAGTCTATCAGAGAAGCAGGATTCTATTTCACGTCTAGAGAAAGATCTTGCAAACTGCCGAATGGAGCTTGTAGAGAGAGAAAAGAGAATTAATGACATTCTGCATAATGAGGCTAACCTAAAAGTTGATTCGGAGAAGCATAGGAAACTGCTGGCTCAGTTTAAGAAGAGGATTGATATTTTGTTAAGGGAAAAGGAAGACATAGGTAAAGAGAACCAGCAACTTTCTAGGCAACTAGATGAAATTAAACAAGGGAAAAGGTCAACTTCTGATACAACTGGTGAACAAGCGATGAAGGAAGAAAAGGACACAAGAATACAGATTCTGGAGAAACATCTGGAGAGACTTAGAGATGAATTAAAGAAGGAGAAGGAAGAAAGTCGCCTAGAGAGAGGAAGACGACTAAAGACTGAAAAGGCCATAAAGGACTCTTACAACAATGTTGAGCAGGAGAAAACAAAATTTGTCAATCAAATTGAGAAGCACAAGGAGTCTCTGAAAAAGTTATCTGATGAGGTCGAAAAGCTTAAGATAGTTATTGGCAATCTTCCCGAGGGTTTGAATGTGGTTCAACTTCTATCTGGATCCAATGTTGACGACTTTGCTGCTTCTTACATATCTGCTGTTGAAAGTTTTGAAAAGGAAGCTCATTCAATATTTCGTGAGCTTGGAGGTCGCGGTAATCTTGGAGATGCAGCTACAATTACAGATGGTTCAACAGCTGCTACAGGTTCTCTTGTCCAAGTTCAATCCCAAAGCATCCCATCTCTGGCTGTTCCTGGAGCTAGCAGTTTACCACCTAAAGCCACTGGAGAAAGTGAGAAAAGACTTGCATTAACATTACCCAAAGCTAGTGTTGAGACTCGTCGAACAGGTAGAAAATTGGTCAGGCCTAGACTCGTAAGACCTGATGAGCCACAAGGTGACACAGAAATGTCTGATGCCGAAGGACCAGTGGGCAAGCCTGGGCCGTCTAGTGACACAGAAACAAGTAATTTTGCTCAATCATCTCAACCATTGGCTCGTAAACGTGTTGCTCCTACGTCCAATTCTGAATTACGTGAAGAATCAGTTGCATCTGGAGAGAAGAGCTCTGATGTAGTTGCACCTGCGTTGAAGAAGTCAAAAGGGTCGGAGTCCCCAGAAGAGAGTACAGAAGAACAACCTGCTGCTAATCTGGAATTTACTGGCAGTCAACCAGCAAGTGAAGAATTATTTGATAGCAGTGAGTTGCCACAAGGCCAAAATGAGGAAGGTGAAGCCCAAAATGAAGATGGTGAAATTGCTGTTGGGAATGACGAGGAATCCAAAGACCCTCAACACTTAGATGGTACAAGTCAAGAGGAATTACAAGGGGACAAAACTGGAATTTTAGAAGAGAATCCGGATCAACCTGATGAGATGCAGAGGGATCACACTGACCCAGACAACCAGCACTCAACATTGGCAACCAGTGGTGAGAGAGAAGAGGGAGAATTGTTGCCAGATGCTGGAGATATTGAGGGTGGTAGTGATTTGTCTAATATTGTCGAAAATCAAGAATCTCGGGAAGGTCAATCTGAGTCTGCTGCAACCCCTGAACGTTCCCCAGCACGAGGGGATGATGATGCTCTAGAGGCTGGTGAGATTAACTCTCCTGAGCTTTCAAGCGATGATAAGAATGATGAGATTGACTTGGTTGAGGAGGCTGCTGATGGTTCTGACAAGTTAATTGATGTTAATGAGCCAATATCAGTTGAGAGTGATCAGGTAGCTGACCCGACACCTGTTGTGAGTGATGGTGCTACTTTGACAAGTAGTGTTACAGAAAGTAGTTCCTCTAAGGTGAACTTACCTGTTCCAAGGCAAGGAACCCCCAGTGCCCCCGCCCCCTCCGAAACAGAAGAGACAACAAAGCAGGCATCACCTATTGGTAGTACCTCAACTACCATAAATTTGTCAGAGCGAGCACGAGAAAGGGCTCAAATGAGACAAGCTGGTTTGGTTTCTACCCCTAATGTTACTAGAGGTCGTGGAAGAGGTGCTCCCCGAGGGCGGGCTCGCGGTCGGACAGTAGTACGCCGACCTCCTCCATCATCCGGTGGTGACCCATGA 6246 0.4302 MPLFLSDEEFSRCSGDGAAVAAKADAFIRGLLHELDTVRAKADAADINAEQNCSLIEQKYLSLAAEFSKLESNVADLQSSLDQRLRELAETQSQNHQIQLQSVEKNREIERLRMEVGELHKSKRQLIELNEQKDLELSEKNATMKSYLDKIVHLSENAAHKEARLSEVEAELARCRAACSRLEQEKEIIEKQNSWLNEELNGKVNSVFELRRKNADLEADISSKLADMERQFNQCSQSLQWNKDRVRELEMKLKSVQEELISAKDAAAVNEEQLSAELSTVNKLNELYKESSKELSKKTTDLEGVIKALESDLKQVEDHYKGKLEKELSARKQVEKEVTDLKEKLEKCEAESEARKKTNELNNLPLSSFTTESWIESIEADSMVEENSLVVPKIPVGVSGTALAASLLRDGWSLAKMYSKYQEAVDALRHEQLGRKESEAVLQRVLYELEEKAEAIIDEREEHEKMADAYSSMSQKLQNSLNENSNYEKTIQELKADLKRHERDYNLVLKETDDLRKQVTVLLKECRDIQLRCGSMGYDNVDDSSNIASRTSTETEAEHVISEHLLTFKDINGLVEQNVQLRSLVRSLSGQIENQEVEFKEKLEMELKKHTEEAASKVAAVLQRAEEQGQMIEALHASVSMYKRLYEEEHNLHLSQSHSSETRAEVGRNTLKTSIESSQEAAKKSLEKSAERVRCLEDDLAKSRSKIILLQSEREKMALEANFSRERLDSFMKEFEHQKAEAKAILERNIEFSQLVVDYQRKLRESSESLIAAEELARKLTMEMSVLKQEKEIISNAEKRASDEVRSLSERVQRLQASLGTIQSTEEVREEARAAERVKQEEYIRKLEKEWAEAKQELNEERESVRRFTLDRDQTIKNSLRQVEDMNKELANALRAVASAESRAAVAEAKLSSLQRKLGSTDDKLVSMGGESGPSTLSSDEVVTELEKAKEEIEKFKEEAHANKVHMLQYKSIAEVNEDALKQIEMAHEKFKTEAEDSKKVLESELNSLREKMLEIENESSLKYEEVASETVGKEEALTSAMAEITNLKEEILTKSSQISALEIQLSGLKENLDMEHQKWRAAQTNYERQVVLQSETIQELTKTSEALSLLQEEASELRKLTNTQKVENNELKARWEEDKAQLEKSRNDAEKKYNEINEQNKILHSQLEAFHIRWAEKERNAAGISSGSSTADAFGDGGLQNVINYLRRSKEIAETEVSLLKQEKLRLQSQLESALKAAESAHATLESERAKSKSFLFSEEEFKSLQLQVREMNLLRESNMQLREENKHNFEECQKLREVAQKARTETDNLENVLREREIELEGCKKEIETLKLEKDNLNNKVLELLERSKHVDVEDYDRVKKLARELQDKLRDRDARIEEMSKSLSEKQDSISRLEKDLANCRMELVEREKRINDILHNEANLKVDSEKHRKLLAQFKKRIDILLREKEDIGKENQQLSRQLDEIKQGKRSTSDTTGEQAMKEEKDTRIQILEKHLERLRDELKKEKEESRLERGRRLKTEKAIKDSYNNVEQEKTKFVNQIEKHKESLKKLSDEVEKLKIVIGNLPEGLNVVQLLSGSNVDDFAASYISAVESFEKEAHSIFRELGGRGNLGDAATITDGSTAATGSLVQVQSQSIPSLAVPGASSLPPKATGESEKRLALTLPKASVETRRTGRKLVRPRLVRPDEPQGDTEMSDAEGPVGKPGPSSDTETSNFAQSSQPLARKRVAPTSNSELREESVASGEKSSDVVAPALKKSKGSESPEESTEEQPAANLEFTGSQPASEELFDSSELPQGQNEEGEAQNEDGEIAVGNDEESKDPQHLDGTSQEELQGDKTGILEENPDQPDEMQRDHTDPDNQHSTLATSGEREEGELLPDAGDIEGGSDLSNIVENQESREGQSESAATPERSPARGDDDALEAGEINSPELSSDDKNDEIDLVEEAADGSDKLIDVNEPISVESDQVADPTPVVSDGATLTSSVTESSSSKVNLPVPRQGTPSAPAPSETEETTKQASPIGSTSTTINLSERARERAQMRQAGLVSTPNVTRGRGRGAPRGRARGRTVVRRPPPSSGGDP* 2082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0474 2081 Coils Coil 1101 1167 - -
Pvu5g0474 2081 Coils Coil 837 864 - -
Pvu5g0474 2081 Coils Coil 1483 1517 - -
Pvu5g0474 2081 MobiDBLite consensus disorder prediction 1641 2081 - -
Pvu5g0474 2081 MobiDBLite consensus disorder prediction 1976 2033 - -
Pvu5g0474 2081 MobiDBLite consensus disorder prediction 1814 1879 - -
Pvu5g0474 2081 Coils Coil 74 115 - -
Pvu5g0474 2081 Pfam TPR/MLP1/MLP2-like protein 1044 1170 IPR012929 GO:0006606
Pvu5g0474 2081 Gene3D - 259 525 - -
Pvu5g0474 2081 Coils Coil 1529 1563 - -
Pvu5g0474 2081 PANTHER NUCLEOPROTEIN TPR 1 2057 - -
Pvu5g0474 2081 MobiDBLite consensus disorder prediction 1708 1739 - -
Pvu5g0474 2081 Coils Coil 600 628 - -
Pvu5g0474 2081 Coils Coil 770 790 - -
Pvu5g0474 2081 MobiDBLite consensus disorder prediction 1890 1910 - -
Pvu5g0474 2081 Coils Coil 239 273 - -
Pvu5g0474 2081 Coils Coil 151 199 - -
Pvu5g0474 2081 Coils Coil 1045 1079 - -
Pvu5g0474 2081 MobiDBLite consensus disorder prediction 1768 1803 - -
Pvu5g0474 2081 PANTHER NUCLEOPROTEIN TPR-RELATED 1 2057 - -
Pvu5g0474 2081 Coils Coil 876 917 - -
Pvu5g0474 2081 Coils Coil 1365 1413 - -
Pvu5g0474 2081 MobiDBLite consensus disorder prediction 1671 1693 - -
Pvu5g0474 2081 Coils Coil 446 466 - -
Pvu5g0474 2081 Coils Coil 679 706 - -
Pvu5g0474 2081 Coils Coil 1294 1349 - -
Pvu5g0474 2081 Coils Coil 306 358 - -
Pvu5g0474 2081 MobiDBLite consensus disorder prediction 1456 1486 - -
Pvu5g0474 2081 Coils Coil 1211 1249 - -
Pvu5g0474 2081 Coils Coil 1266 1286 - -
Pvu5g0474 2081 Coils Coil 939 966 - -
Pvu5g0474 2081 Coils Coil 798 818 - -
Pvu5g0474 2081 Coils Coil 992 1019 - -
Pvu5g0474 2081 Coils Coil 477 518 - -
Pvu5g0474 2081 Coils Coil 1428 1469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0474 Pvu-Chr5 4876014 4906900 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0474 K09291 - gmx:100811882 3240.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0474 5 4876014 4906900 Pvu5g0474 5 4876014 4906900 ECH