Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0462 ATGAAGTATGTGTTGGTGACTGGTGGTGTTGTGAGTGGACTTGGGAAAGGAGTCACTGCCAGCAGTATTGGCCTGATCCTCAAAGCATGTGGTCTTAGAGTTACCTCTATCAAGATTGATCCCTACTTGAACACTGATGCGGGAACAATGTCTCCTTTCGAGCATGGGGAGGTTTTTGTCTTAGATGACGGTGGAGAGGTTGACCTTGATCTTGGAAACTATGAGCGATTTTTAGACATCAAATTAACTCGAGACAATAATATCACTACTGGGAAAATTTATCAGTCTGTTATTGAGAAGGAGAGAAGAGGAGATTATCTTGGAAAGACAGTACAGGTAGTTCCACACATAACAGATGCTATCCAAGAATGGATAGAACGTGTGGCAAAGATACCAGTTGACGGCAAAGAAGGGCCAGCTGATGTTTGTGTCATTGAATTGGGTGGAACTATAGGGGATATTGAGTCCATGCCTTTTATTGAAGCACTTGGCCAGTTTTCATACCGTGTAGGCCCTGGCAACTTCTGTTTGGTTCATGTCAGCTTGGTTCCTATTCTCCATGTTGTTGGTGAACCGAAAACAAAGCCAACTCAGCACAGTGTTCGTCAACTTAGAGGATTAGGTTTGACCCCTAATCTTCTTGCTTGTCGAAGTTCGAAGGAACTTGATGATAATGTCAAGGCAAAACTTGCTCAATTTTGTCATGTGCCGCTGTCAAACATACTTACTCTCCATGATGTTCCAAACATTTGGCATATTCCTCTGCTATTGAAAGACCAGAAGGCACATGAGGCGATCCTGAAAGCATTAAACCTGCTAGGTGTTGCTGCAGAGCCTAATTTGAAGGAGTGGACTGCAAGGACAAAAATTTATGACAGATGTGATGAAACTGTTAGAATTGCAATGGTGGGAAAATACACTGGCCTTTCAGATGCATATCTTTCTGTTCTGAAGGCACTTTTACATGCTTCTGTTGCTCGAAACCGAAAACTTAGCGTGGACTGGGTTCCGGCTGGGGATCTTGAAGAAGTCACTTATAAAGAGGATCCTGAGGCATACAAAGCTGCTTGGAATCTCTTAAAGGGCGCTGATGGTGTTCTAGTTCCTGGAGGTTTTGGTGATAGAGGAGTGCAAGGGAAAATTCTTGCTGCTAAGTATGCTCGAGAACATAATGTTCCATTTCTGGGCATTTGCTTGGGGATGCAAATTGCTGTCATTGAGTATGCACGATCTGTTCTTGGTCTGCATGATGCCACTAGCACAGAATTTAATCCTGAAACCAAGACCCCTTGTGTCATATTTATGCCAGAAGGCTCAAAGACTCATATGGGGGCAACTATGCGACTTGGTTCAAGAAGAACCTACTTTGAAGTTGCTGACAGCAAATCTGCAAAATTGTATGGCAATGTAAGCTTTATTGATGAGCGACATCGACATAGATACGAGGTTAATCCTGACATGGTATCACAGCTAGAGACTGCTGGTCTATCTTTTGTTGGCAAAGATGAAACTGGGAGGCGCATGGAAATAGTTGAATTGCCTAGCCATCCTTTTTATATTGGCGTTCAGTTTCACCCTGAGTTCAAGTCCAGACCAGGAAAACCTTCTGCACTCTTCTCAGGATTAATAGCAGCAGCAAGTGAACCAAGGTGGAAGGTGTCAAATGGTTATTCCAAGTTAACTGCGTGGAATAGACACTCACCAAAACTGAAAGCACACCAAAATGTAAAGGGCTTCAAAGCATCCAATGGTTCCTTGAATGGTGTATATACCAATGGCAATGGTGTGTATGTGGATGGTAGTTGTTAG 1809 0.4317 MKYVLVTGGVVSGLGKGVTASSIGLILKACGLRVTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDIKLTRDNNITTGKIYQSVIEKERRGDYLGKTVQVVPHITDAIQEWIERVAKIPVDGKEGPADVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLVHVSLVPILHVVGEPKTKPTQHSVRQLRGLGLTPNLLACRSSKELDDNVKAKLAQFCHVPLSNILTLHDVPNIWHIPLLLKDQKAHEAILKALNLLGVAAEPNLKEWTARTKIYDRCDETVRIAMVGKYTGLSDAYLSVLKALLHASVARNRKLSVDWVPAGDLEEVTYKEDPEAYKAAWNLLKGADGVLVPGGFGDRGVQGKILAAKYAREHNVPFLGICLGMQIAVIEYARSVLGLHDATSTEFNPETKTPCVIFMPEGSKTHMGATMRLGSRRTYFEVADSKSAKLYGNVSFIDERHRHRYEVNPDMVSQLETAGLSFVGKDETGRRMEIVELPSHPFYIGVQFHPEFKSRPGKPSALFSGLIAAASEPRWKVSNGYSKLTAWNRHSPKLKAHQNVKGFKASNGSLNGVYTNGNGVYVDGSC* 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0462 602 SUPERFAMILY Class I glutamine amidotransferase-like 297 548 IPR029062 -
Pvu5g0462 602 Gene3D - 1 292 IPR027417 -
Pvu5g0462 602 CDD CTPS_N 2 268 IPR017456 GO:0003883|GO:0006221
Pvu5g0462 602 PANTHER CTP SYNTHASE 1 559 IPR004468 GO:0003883|GO:0006221
Pvu5g0462 602 Gene3D - 294 556 IPR029062 -
Pvu5g0462 602 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 272 IPR027417 -
Pvu5g0462 602 Pfam CTP synthase N-terminus 2 272 IPR017456 GO:0003883|GO:0006221
Pvu5g0462 602 Hamap CTP synthase [pyrG]. 1 550 IPR004468 GO:0003883|GO:0006221
Pvu5g0462 602 PANTHER CTP SYNTHASE 1 559 - -
Pvu5g0462 602 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 299 552 - -
Pvu5g0462 602 TIGRFAM PyrG: CTP synthase 1 545 IPR004468 GO:0003883|GO:0006221
Pvu5g0462 602 CDD GATase1_CTP_Synthase 298 543 IPR033828 GO:0003883|GO:0006241
Pvu5g0462 602 Pfam Glutamine amidotransferase class-I 309 544 IPR017926 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0462 Pvu-Chr5 4499033 4505633 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0462 K01937 - gmx:100788720 1128.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1881 11 45693470 45700128 Pvu5g0462 5 4499033 4505633 PCT