LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu3g0268	ATGATAGTGAGGTTAGGACTCATAGTTGCTGCTTCACTTGCAGCCTTTACTGTTAAGCAGCTGAATGTCACAAGCTCAAAACCAGAGCATAAAGATGACGGCACAGAAGAGGAAAGTGTCACAAGATTTACTGATGCACTCCAAGATAAAGAAAGGGAGGAGGAAGAGGAGGAAGAGGAGAAAGAGGAGGTTAAGCTAATTAGCAGCATAATAAATCGAGCAAATGACTTTGAAGATGATATTCTGCCAGAATTTGAAGATCTTCTGTCAGGGGAGATTGAGTTTCCATTACCACCTGATAGGGATGAGAAAGACAGAGTTTATGAAATTGAAATGGCAAACAATGAAAGTGAACTTGAGAGATTGCGACTGCTGGTGAAGGAATTGGAGGAGAGGGAAGTGAAACTTGAAGGAGAATTGCTGGAGTATTATGGTTTGAAGGAGCAGGAATCAGACATTGTGGAGTTGCAAAGGCAACTGAAAATTAAGGCTGTAGAAATAGACATGCTTAATATCACAATTAATTCCTTGCAGGCAGAAAGGAAAAAGCTCCAAGAAGAACTCACACAAGGAGCTTCAGCCAAGAGAGAACTTGAGGTGGCTAGAAACAAGATCAAAGAGCTACAAAGGCAGATGCAGCTTGAGGCTAACCAAACAAAAGGCCAGTTGTTGTTGCTTAAACAACAAGTTTTGGGTCTGCAGGTAAAAGAAGAAGAGGCTGCTACAAAAGATGCTCAAGTTGAAAAGAAACTGAAAGCTGTGAATGACTTAGAGGTTGCAGTAGTGGAGCTTAAGAGAAGAAACAAAGAACTTCAACACGAAAAACGAGAGTTAACAGTTAAACTCAATGCTGCTGAATCTAGAGCAGCTGAGCTCTCCAATATGACAGAGAGTGACATGGTTGCCAAGGCAAAAGAGGAGGTGAGTAACCTGAGGCATGCAAATGAAGACCTGCAAAAGCAAGTGGAAGGGCTGCAGATAAATAGGTTCAGTGAGGTTGAAGAGCTTGTGTACCTTCGTTGGGTTAATGCATGCTTGAGATATGAGCTAAGAAATTACCAGACACCCCAAGGAAAAGTATCAGCCCGTGATCTCAGCAAGAGTCTTAGCCCCAAATCACAAGAGAAAGCTAAGCAACTGATGTTAGAATATGCTGGATCAGAACGTGGACAAGGAGACACAGATCTTGAAAGCAATTTCTCCCATCCCTCTTCACCAGGAAGTGATGATTTTGACAATGCTTCCATTGATAGCTATTCTAGCAAATATAGCACTCTCAGCAAGAAAACTAGCCTAATCCAGAAGTTTAAGAAATGGGGTAAAAGCAAAGATGATTCCAGTGCTCTTTCATCACCAGCCAGATCCTTTTCAGGAGGTTCTCCAAGGAGGATGAGTGTGAGTGTTAAACCAAAGGGTCCACTAGAATCCTTAATGATAAGGAATGCTGGAGATACTGTTTCCATCACCAGCTTTGGACTCAGGGATCAGGAATCTGTTGATTCTCCTGAAACTCCAACTGACATGAGAAGAGTTCCTTCCAGTGATTCCTTAAATTCTGTTGCTGCTTCATTCCAATTGATGTCTAAGTCAGTTGATGGATTGATGGATGAGAAGTACCCTGCTTATAAAGATCGCCACAAGTTGGCCTTGGCAAGGGAAAAACAAATCAAAGAAAAAGCAGAGAAAGCAAGAGTGCAGAAGTTTGGTGACAATTCAGGTTTGAGTATGAGCAAGGCTGAAAGAGGAATTCCTATATCTTTGCCACCAAAGCTTACTCAAATAAAGGAGAAACCAGTTGTTTCTGGCACTCCAAATGATAAATCTGAAGATGGAAAGGAGGCTGATGATCAAACCATTAGCAAGATGAAGCTTGCTCACTTTGAGAAAAGGCCTACTAGGGTGCCTAGGCCTCCTCCTAAGCCATCTGGTGGTGGTGGTGGTGGTGCTACCACAAATGCAAATCCTTCCAATGGAGTACCATCTGCTCCACCACTTCCTCCTCCTCCTCCAGGTGCTCCACGGCCGCCGCCTCCGCCAGGTGGTGGACCACCTCCCCCTCCTCCTCCCCCAGGAAGCCTATCAAGAGGGGGAGTAGATGGTGACAAAGTTCACAGAGCTCCACAGCTAGTTGAATTTTATCAGTCATTGATGAAAAGAGAGGCAAAGAAAGATACTTCAACACTTTTGGTTTCCTCAACAAGTAATGCATCTGATGCTAGGAGCAACATGATTGGGGAAATTGAGAATAGATCATCATTCCTCCTAGCTGTGAAAGCTGACGTAGAAACACAAGGTGATTTTGTCATGTCCTTGGCAGATGAAGTTCGAGGAGCCTCCTTCTCAGATATTAATGATTTGGTGGCCTTTGTGAACTGGCTAGATGAGGAACTGTCCTTCCTGGTTGATGAACGAGCCGTCCTCAAACACTTTGACTGGCCTGAAGGGAAAGCAGATGCACTAAGGGAGGCAGCTTTCGAATATCAGGATTTGATGAAGCTGGAGAACCGAGTCTCCACATTCATTGATGATCCCAATCTACCATGTGAAGCTGCTCTGAAGAAAATGTATTCATTGCTTGAAAAAGTGGAGCAAAGCGTATATGCACTCTTGCGGACGAGAGATATGGCTATTTCACGGTACAAAGAATTTGGAATTCCAGCAAATTGGCTAATGGATTCAGGAGTTGTAGGCAAGATCAAGCTTTCTTCTGTACAACTAGCAAGGAAGTATATGAAACGTGTTGCATCTGAACTTGATGCATTATCTGGTCCAGAAAAAGAACCAGCTAGAGAGTTTTTGATTCTGCAAGGCGTGCGTTTCGCATTCCGTGTCCATCAGTTTGCAGGAGGCTTCGATGCAGAGAGCATGAAGGCTTTTGAAGACCTAAGGAGTCGAATCCAAACCTCTCAGGCTGGCGAAGATAACAAATCAGAAACATAG	2940	0.4361	MIVRLGLIVAASLAAFTVKQLNVTSSKPEHKDDGTEEESVTRFTDALQDKEREEEEEEEEKEEVKLISSIINRANDFEDDILPEFEDLLSGEIEFPLPPDRDEKDRVYEIEMANNESELERLRLLVKELEEREVKLEGELLEYYGLKEQESDIVELQRQLKIKAVEIDMLNITINSLQAERKKLQEELTQGASAKRELEVARNKIKELQRQMQLEANQTKGQLLLLKQQVLGLQVKEEEAATKDAQVEKKLKAVNDLEVAVVELKRRNKELQHEKRELTVKLNAAESRAAELSNMTESDMVAKAKEEVSNLRHANEDLQKQVEGLQINRFSEVEELVYLRWVNACLRYELRNYQTPQGKVSARDLSKSLSPKSQEKAKQLMLEYAGSERGQGDTDLESNFSHPSSPGSDDFDNASIDSYSSKYSTLSKKTSLIQKFKKWGKSKDDSSALSSPARSFSGGSPRRMSVSVKPKGPLESLMIRNAGDTVSITSFGLRDQESVDSPETPTDMRRVPSSDSLNSVAASFQLMSKSVDGLMDEKYPAYKDRHKLALAREKQIKEKAEKARVQKFGDNSGLSMSKAERGIPISLPPKLTQIKEKPVVSGTPNDKSEDGKEADDQTISKMKLAHFEKRPTRVPRPPPKPSGGGGGGATTNANPSNGVPSAPPLPPPPPGAPRPPPPPGGGPPPPPPPPGSLSRGGVDGDKVHRAPQLVEFYQSLMKREAKKDTSTLLVSSTSNASDARSNMIGEIENRSSFLLAVKADVETQGDFVMSLADEVRGASFSDINDLVAFVNWLDEELSFLVDERAVLKHFDWPEGKADALREAAFEYQDLMKLENRVSTFIDDPNLPCEAALKKMYSLLEKVEQSVYALLRTRDMAISRYKEFGIPANWLMDSGVVGKIKLSSVQLARKYMKRVASELDALSGPEKEPAREFLILQGVRFAFRVHQFAGGFDAESMKAFEDLRSRIQTSQAGEDNKSET*	980

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu3g0268	979	Coils	Coil	146	218	-	-
	Pvu3g0268	979	PANTHER	PROTEIN CHUP1, CHLOROPLASTIC	1	977	IPR040265	-
	Pvu3g0268	979	MobiDBLite	consensus disorder prediction	23	63	-	-
	Pvu3g0268	979	MobiDBLite	consensus disorder prediction	25	49	-	-
	Pvu3g0268	979	Coils	Coil	247	295	-	-
	Pvu3g0268	979	MobiDBLite	consensus disorder prediction	558	701	-	-
	Pvu3g0268	979	Coils	Coil	40	70	-	-
	Pvu3g0268	979	Coils	Coil	301	328	-	-
	Pvu3g0268	979	MobiDBLite	consensus disorder prediction	357	375	-	-
	Pvu3g0268	979	MobiDBLite	consensus disorder prediction	494	516	-	-
	Pvu3g0268	979	MobiDBLite	consensus disorder prediction	392	413	-	-
	Pvu3g0268	979	PANTHER	PROTEIN CHUP1, CHLOROPLASTIC	1	977	-	-
	Pvu3g0268	979	Coils	Coil	112	139	-	-
	Pvu3g0268	979	MobiDBLite	consensus disorder prediction	357	413	-	-
	Pvu3g0268	979	MobiDBLite	consensus disorder prediction	602	635	-	-
	Pvu3g0268	979	Coils	Coil	543	563	-	-
	Pvu3g0268	979	MobiDBLite	consensus disorder prediction	445	462	-	-
	Pvu3g0268	979	MobiDBLite	consensus disorder prediction	659	693	-	-
	Pvu3g0268	979	MobiDBLite	consensus disorder prediction	442	472	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu3g0268	Pvu-Chr3	2365928	2372073	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu3g0268	-		-	gmx:100813394	1526.15

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pvu3g0268	3	2365928	2372073	Pvu3g0268	3	2365928	2372073	ECH