Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0340 ATGGCCACCACCACCGCCACCACTTCTCTTCTCGCTCTCCTCCTTCTCTTCCTTGTCGCTCTCGTCTCTGCTGGCCGTGACCTCGTCGGAGACTTCCTCCGACTGCCGTCTGATTCCGGTAACGGCGACAACGTCCATGGAACGCGCTGGGCCATCCTCTTCGCTGGTTCGAGCGGCTATTGGAATTACAGACATCAGGCCGATATTTGTCATGCCTATCAATTACTGAGGAAAGGTGGCCTGAAAGATGAAAATATCATTGTTTTTATGTATGATGACATTGCATTCAATTCGGAAAATCCAAGGCGTGGAGTCATCATTAACAGTCCAAATGGAGATGATGTTTATAAAGGAGTTCCAAAGGATTACACTGGTGAAGATGTTACTGCTCATAACTTTTATGCTGCTTTACTTGGAGATAAGTCGAAACTTACTGGTGGCAGTGGGAAAGTTGTGAATAGTGGGCCCAATGATCACATATTTATATTCTACTCTGATCATGGTGGTCCAGGGGTGCTCGGGTCGCCTGCTGGTCCTTACATTTATGCATCTGATCTGAATGAAGTATTGAAGAAAAAACATGCTTCTGGAACGTATAAAAACCTAGTATTTTATTTGGAGGCATGTGAATCTGGAAGTATCTTTGAAGGTCTTCTTCCTGAAGATATCAATGTTTATGCAACAACAGCTTCGAATGCCGATGAAAGTAGTTGGGGAACATATTGTCCTGGGGAGGATCCTAGTCCTCCCCCAGAATATTCAACCTGCTTGGGTGACCTGTACAGTGTTGCTTGGATGGAAGACAGTGATAGACACAATTTGCGAACAGAAACTTTGCACCAACAATATAAATTGGTTAAAGAGAGGACTATATCTGGAGGTTTATACTATGGCTCTCACGTGATGCAGTATGGTGATGTAGGGCTTAGCAAGGATATTCTCTTCCATTATTTGGGTACAGATCCTGCAAATGAGAATTTGACTTTCGTGGATGAAAACTCCTTATGGTCATCTTCAAAAGCAGTCAACCAAAGGGATGCTGATCTCGTCCATTTTTGGGATAAGTTCCGCAAAGCTCCTGAGGGTTCTCCTAAGAAAAATGAAGCTCGGAAACAAGTTCTGGAAGTAATGTCTCACAGAATGCATATAGACGACAGTGTGGAACTTGTTGGAAAGCTTTTATTTGGCATTGAAAAGGCTCCTGAATTACTGAATGCTGTAAGACCGGCTGGATCCGCACTTGTTGATGACTGGGACTGCCTGAAAACCATGGTAAGGACTTTTGAGACACATTGTGGATCGTTGTCTCAGTATGGGATGAAACACATGAGGTCCTTTGCGAACATGTGCAATGTAGGAATAAAGAAGGAGCAAATGCGTGAAGCCTCAGCACAAGCTTGTGTCACTATTCCTGCCAATCCCTGGAGTTCTCTGCAAAGGGGTTTCAGTGCGTAA 1455 0.4426 MATTTATTSLLALLLLFLVALVSAGRDLVGDFLRLPSDSGNGDNVHGTRWAILFAGSSGYWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNSENPRRGVIINSPNGDDVYKGVPKDYTGEDVTAHNFYAALLGDKSKLTGGSGKVVNSGPNDHIFIFYSDHGGPGVLGSPAGPYIYASDLNEVLKKKHASGTYKNLVFYLEACESGSIFEGLLPEDINVYATTASNADESSWGTYCPGEDPSPPPEYSTCLGDLYSVAWMEDSDRHNLRTETLHQQYKLVKERTISGGLYYGSHVMQYGDVGLSKDILFHYLGTDPANENLTFVDENSLWSSSKAVNQRDADLVHFWDKFRKAPEGSPKKNEARKQVLEVMSHRMHIDDSVELVGKLLFGIEKAPELLNAVRPAGSALVDDWDCLKTMVRTFETHCGSLSQYGMKHMRSFANMCNVGIKKEQMREASAQACVTIPANPWSSLQRGFSA* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0340 484 Gene3D - 47 343 - -
Pvu1g0340 484 Gene3D - 344 472 IPR046427 -
Pvu1g0340 484 PRINTS Hemoglobinase (C13) cysteine protease signature 50 74 IPR001096 GO:0006508|GO:0008233
Pvu1g0340 484 PRINTS Hemoglobinase (C13) cysteine protease signature 75 104 IPR001096 GO:0006508|GO:0008233
Pvu1g0340 484 PRINTS Hemoglobinase (C13) cysteine protease signature 122 137 IPR001096 GO:0006508|GO:0008233
Pvu1g0340 484 PRINTS Hemoglobinase (C13) cysteine protease signature 150 169 IPR001096 GO:0006508|GO:0008233
Pvu1g0340 484 PRINTS Hemoglobinase (C13) cysteine protease signature 199 215 IPR001096 GO:0006508|GO:0008233
Pvu1g0340 484 Pfam Peptidase C13 family 49 319 IPR001096 GO:0006508|GO:0008233
Pvu1g0340 484 PANTHER HEMOGLOBINASE FAMILY MEMBER 10 483 IPR001096 GO:0006508|GO:0008233
Pvu1g0340 484 PANTHER VACUOLAR-PROCESSING ENZYME 10 483 - -
Pvu1g0340 484 PIRSF AE 3 484 IPR043577 GO:0004197|GO:0051603
Pvu1g0340 484 PIRSF Legumain 3 484 IPR001096 GO:0006508|GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0340 Pvu-Chr1 3230314 3236214 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0340 K01369 - gmx:547700 856.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0340 1 3230314 3236214 Pvu1g0340 1 3230314 3236214 ECH
Pvu1g0340 1 3230314 3236214 Pvu9g0781 9 12522091 12525139 PCT