Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0338 ATGAAGATTGTTGCAGTTGCAGTTAGGTCATTAAGTGTCAATTTGTCACATCAGTTTTATCAGACTCATACGCTCAGAAGTCTTTCCACTTGGAGATTTACAGATAATCGAACTGGTGATCAGCAGGCTAACAAGTCAGAGTATCCTGAGGAGTTTGGGATGTTTGGAGAGAATCGTGGTAGATATGCCCAATTTGATTCCGCTCTTGAAAAGATTAACCAACAGGGAATAGGTAGTGATCATCAGGCTAACAAGTCATGGTCTCCTGAGGAGTTTGGGAAGTTTGGAGAAAATCGTGGTAGATATGCCCAATTTGATTCCATTATTGAAAAGATTGACCAACAGGGAATGGGTCGACAAAGATCTGGTTCAGGAAATGCTTTTGGTTCTGATATAATGGATAACCTAGAAGAAAATCATGACACTTTACTTGATGGAATGGATGGAAGACTGAAGAATGCTGCCTCATACTTTGAATTTGATGAGGAAGAAATTGACAAAGAAGATTATGCTTTTCGATATGATGCCAATTTTCCACTTGGTTATACATATGATACAAAGGATCTGGATCTTACAAAACCTGGTGTACGCAAGCCTCCCGTAAGGTGGGAATTCAGTGTAACCACCAAAGAAGTTCTTAGGAAAGCAGATTTCAGGAATGTTAGATTCCTGGCAAATTTCTTAACAGAGGCAGGAATTATTATCAAGAGAAGCCAGACCGGCATTAGTGCAAAGGCTCAAAGAAAGGTTGCCAGGGAGATAAAAACTGCTCGAGCATTGGGCTTGTTGCCCTTTACAACAATGGGAACAAAGTCATTTGTTTTTGGAAAAACTATGGAGAGTCTTGATGAAGACTTTGCTTACAAAACTAAGACGCAGGACATGGATATGGAACATGATTTGGACGTAGTAGATCAAGCTTAG 924 0.3994 MKIVAVAVRSLSVNLSHQFYQTHTLRSLSTWRFTDNRTGDQQANKSEYPEEFGMFGENRGRYAQFDSALEKINQQGIGSDHQANKSWSPEEFGKFGENRGRYAQFDSIIEKIDQQGMGRQRSGSGNAFGSDIMDNLEENHDTLLDGMDGRLKNAASYFEFDEEEIDKEDYAFRYDANFPLGYTYDTKDLDLTKPGVRKPPVRWEFSVTTKEVLRKADFRNVRFLANFLTEAGIIIKRSQTGISAKAQRKVAREIKTARALGLLPFTTMGTKSFVFGKTMESLDEDFAYKTKTQDMDMEHDLDVVDQA* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0338 307 PANTHER 30S RIBOSOMAL PROTEIN S18 89 298 IPR001648 GO:0003735|GO:0005840|GO:0006412
Pvu1g0338 307 Gene3D Ribosomal protein S18 205 268 IPR036870 -
Pvu1g0338 307 TIGRFAM S18: ribosomal protein bS18 208 266 IPR001648 GO:0003735|GO:0005840|GO:0006412
Pvu1g0338 307 SUPERFAMILY Ribosomal protein S18 196 266 IPR036870 -
Pvu1g0338 307 Pfam Ribosomal protein S18 215 263 IPR001648 GO:0003735|GO:0005840|GO:0006412
Pvu1g0338 307 PRINTS Ribosomal protein S18 family signature 223 233 IPR001648 GO:0003735|GO:0005840|GO:0006412
Pvu1g0338 307 PRINTS Ribosomal protein S18 family signature 241 255 IPR001648 GO:0003735|GO:0005840|GO:0006412
Pvu1g0338 307 PRINTS Ribosomal protein S18 family signature 255 265 IPR001648 GO:0003735|GO:0005840|GO:0006412
Pvu1g0338 307 PANTHER 28S RIBOSOMAL PROTEIN S18C, MITOCHONDRIAL 89 298 - -
Pvu1g0338 307 Hamap 30S ribosomal protein S18 [rpsR]. 193 268 IPR001648 GO:0003735|GO:0005840|GO:0006412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0338 - - pvu:PHAVU_001G033300g 607.446