Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0335 ATGAGATCCATAATCTTCATTCTCTTGGGGCTGTTAATCACAGTCCATGGTGGTTCTTTATCAAGACACAAGATTTTGGAAGTTGAAAGAAAATTAAAGCATCTTAGAAGATATTCCTTGAAAACTATCGTGAGTGAAGATGGGGATGTGATTGATTGCATTGACATCAATAAGCAACCAGCCTTTGATCATCCTGCATTGAAGGGTCACAAAATCCAACTAACTTGCATACACCAGATGGCTCCCACTTATAATTCAGCAAAAGAAGACATACCAGTAGGGACAAGAACTGCTAGAAACAAAAACCATTCAAGGAATGGCAAAATGATGAATCAAAGGGGTGAAGAGTTATCTCTCACTGTGACTTCACAAGTGTGGCAGAAAAGTGGAAAATGTCCAGAGGCAACAATACCTGTTAGAAGAATAAGAAAAAGAGAGCTACTCAAGGCTCATTCAGTTGAAGACTATGGAAGGAAGAAGCCAAGCTTCTATCACCATCAAAATGGCCAAGTGAATAAGAATCTTGATTCCTTTGTTCAACTTAAAAACCACTCTAAGGCAATATTGTTCACAGTTGGGTATCGTTACTTGGGAGGAAAAGCAGACCTGAGAGTGTGCAACCCTTATGTTGAAAAGGATGATGAATACAGCACTACTCAAGTGGCTCTTCTAACAGGCTCATACAATGACTTTGAGTGTGTTCAATCTGGATGGGCAGTGAATCCCAGTGTGTATGGAGATAGACAAACTCGGTTATTTGTATACTGGACGGCTGATGGTTCAAAGAAAACGGGTTGCTTTGATCTAACTTGTCCTGGGTTTATCCAAACCAACAATGAAATTGCCTTGGGTGCTGCAATATATCCAATCTCAATTCCTGGTGGCCTTCCATACACAATAACAATTTACATATATAAGGATCCATATACCAACAATTGGTGGGTGCAATATGGTGAGAAGACGAACATAGGTTATTGGCCACCTGAGTTGTTTGAAACAATATGTTACAATGCACAGTCTGTGGAGTGGGGTGGTGAAGTTTACAGTTCAAGCATTGGACACACTCCTCACACAGCAACACAAATGGGCAATGGCCAATTTGCCACAGTTTTGGATTTTTCATCTGCAATAACAAGAATGAGAATTCATGACAATTCTGAATTCTTGAAAATCCCAGAATGGGTCACTGATTATTCTGATGAATATAATTGCTATGATGTTTGGTTAATGTCAGATTATATTGATGATCCTCAATTCTACTATGGGGGTCCTGGTAGAAATCCAAAGTGCCCTTAA 1296 0.3951 MRSIIFILLGLLITVHGGSLSRHKILEVERKLKHLRRYSLKTIVSEDGDVIDCIDINKQPAFDHPALKGHKIQLTCIHQMAPTYNSAKEDIPVGTRTARNKNHSRNGKMMNQRGEELSLTVTSQVWQKSGKCPEATIPVRRIRKRELLKAHSVEDYGRKKPSFYHHQNGQVNKNLDSFVQLKNHSKAILFTVGYRYLGGKADLRVCNPYVEKDDEYSTTQVALLTGSYNDFECVQSGWAVNPSVYGDRQTRLFVYWTADGSKKTGCFDLTCPGFIQTNNEIALGAAIYPISIPGGLPYTITIYIYKDPYTNNWWVQYGEKTNIGYWPPELFETICYNAQSVEWGGEVYSSSIGHTPHTATQMGNGQFATVLDFSSAITRMRIHDNSEFLKIPEWVTDYSDEYNCYDVWLMSDYIDDPQFYYGGPGRNPKCP* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0335 431 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 36 429 - -
Pvu1g0335 431 PANTHER CARBOXYL-TERMINAL PEPTIDASE 36 429 - -
Pvu1g0335 431 Pfam Neprosin 214 424 IPR004314 -
Pvu1g0335 431 Gene3D - 207 321 - -
Pvu1g0335 431 Pfam Neprosin activation peptide 42 173 IPR025521 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0335 Pvu-Chr1 3183951 3189658 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0335 - - gmx:100816380 712.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0335 1 3183951 3189658 Pvu1g0335 1 3183951 3189658 ECH
Pvu1g0335 1 3183951 3189658 Pvu9g0778 9 12494681 12498452 PCT