Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0333 ATGGCTTCTTCTTCACCTCCTTCTCCCTCTTTTCTCACGCACCTTCCTCTTCCGCTTCAACCTCCTTCTTCCTCTCTCCAAGGTGAGAAGCGCGTGAGCGAAGATGAACCGCGAGTTCCGATTCACGTCGTGACGGAGGCGTCGCAACTTCCCGCCGACTTCCTGGAACCCTCGCCTCAGTCGGAGCTCATCATTGGCTTTGACTGCGAGGGTGTTGACTTGTGCCGCAAAGGCACTCTCTGTATAATGCAGCTTGCATTTCCTGATGCTGTGTACTTGGTTGATGCGATTGAAGGGGGAGAAGAGCTTATCAAAGCGTGTAAGCTTGCACTTGAATCTAAATACATCACAAAAGTGATTCATGATTGCAAACGAGACAGTGAGGCACTCTTCTTTCAGTTTGGCATCAAGTTGAACAATGTGGTGGATACTCAGATTGCTTATTCACTAATAGAGGATCAAGAAGGACGAACGAGATTGCGAGATGACTACATTTCATTTGTTGGCCTCCTTGCAGATCCACGTTATTGTGGCATATCATATGTTGAGAAGGAAGAAGTTCGTGACCTCCTTCGACAGGACCCTGAGTTTTGGACACACAGACCATTATCTGAACTAATGGTCCGTGCTGCTGCTGATGATGTTCGTTTTCTTCTCTACATTTATCACCGAATGATGGAGAAGTTAAATGAGCGGTCCTTATGGTATCTTGCAGTTCGTGGTGCCTTGTATTGCCGATGTTTCTGTTTGAACAGTAACGATTTTGCTGATTGGCCATCTCTACCTTCGATTCCAGATAGCCTGAATGCTGATGATAATGGTCCCGATGAAGAAATTCTTTCAGTTCTTGATGTTCCCCCAGGAAAGATGGGACGTGTTATTGGGAAAAGAGGGGCGACAATTTTGTCAATTAAGGCTGCTTGCAATGCGGAAATTCACACCGGAGGTCCCAAGGGCCCACCTGACAAGGTCTTTATCATCGGACCAGTGAAGGAAGTGAGGAAAGCCGAGGCCATGATTCGAGGTAGATTCTTGGATATGTAG 1044 0.4693 MASSSPPSPSFLTHLPLPLQPPSSSLQGEKRVSEDEPRVPIHVVTEASQLPADFLEPSPQSELIIGFDCEGVDLCRKGTLCIMQLAFPDAVYLVDAIEGGEELIKACKLALESKYITKVIHDCKRDSEALFFQFGIKLNNVVDTQIAYSLIEDQEGRTRLRDDYISFVGLLADPRYCGISYVEKEEVRDLLRQDPEFWTHRPLSELMVRAAADDVRFLLYIYHRMMEKLNERSLWYLAVRGALYCRCFCLNSNDFADWPSLPSIPDSLNADDNGPDEEILSVLDVPPGKMGRVIGKRGATILSIKAACNAEIHTGGPKGPPDKVFIIGPVKEVRKAEAMIRGRFLDM* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0333 347 PANTHER - 22 344 - -
Pvu1g0333 347 CDD Egl_like_exo 53 249 - -
Pvu1g0333 347 MobiDBLite consensus disorder prediction 1 37 - -
Pvu1g0333 347 Pfam 3'-5' exonuclease 52 229 IPR002562 GO:0003676|GO:0006139|GO:0008408
Pvu1g0333 347 ProSiteProfiles Type-1 KH domain profile. 278 340 - -
Pvu1g0333 347 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 275 344 IPR036612 GO:0003723
Pvu1g0333 347 SMART kh_6 277 345 IPR004087 GO:0003676
Pvu1g0333 347 SUPERFAMILY Ribonuclease H-like 30 252 IPR012337 -
Pvu1g0333 347 Pfam KH domain 283 341 IPR004088 GO:0003723
Pvu1g0333 347 PANTHER EGALITARIAN, ISOFORM B 22 344 - -
Pvu1g0333 347 Gene3D K Homology domain, type 1 267 344 IPR036612 GO:0003723
Pvu1g0333 347 CDD KH-I 283 340 - -
Pvu1g0333 347 SMART 35exoneu6 41 230 IPR002562 GO:0003676|GO:0006139|GO:0008408
Pvu1g0333 347 Gene3D - 5 245 IPR036397 GO:0003676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0333 K18740 - gmx:100810098 591.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0333 1 3164324 3169192 Pvu1g0333 1 3164324 3169192 ECH