Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0332 ATGGATTTCATGAAGGTCTTCGATCAAACCGTTCGAGAAATAAAGAGAGAGGTGAATCTGAAGGTGCTTAAGGTTCCGGAAATCGAACAGAAGGTGCTCGATGCCACTGATAATGAACCTTGGGGTCCTCATGGTACTGCACTGGCAGAGATTTCCCAGGCTACCAAAAAATTTACTGAATGTCAAATGGTCATGAATGTCCTTTGGACAAGACTGGGCGAAACTGGAAAAGATTGGAGATATGTATACAAGGCGTTAGCGGTTATAGAGTATTTGGTAGCACATGGATCTGAACGTGCAGTTGACGACATTATAGAACATACTTTTCAGATTTCAGCACTTTCTAGTTTTGAATATGTTGAGCCAAGTGGGAAGGACGTAGGACTCAATGTAAGGAAGAAGGCTGAAAACATTGTGTCCCTTTTGAATGATAGAGATAAGATACATGATGTCAGAAATAAAGCTGCTGCAAACCGTGACAAGTATATTGGTGTTTCTTCTAGTGGTATTACATACAAGTCTGGTGGGTCCTCCTCTTATAGTAGTGGTGGCAGCTTTCAGAGCAGTGGTAAGTATGGAGGCTTTGGATCTAGAGATGGTGACAGGTTTGGTGATAACAATAGAGACAAGGTGGGATCCTATGATGAAGATTACCAGGGGAAATCACACCATTCCGTTGCAAGTGACAATCAAGACTACTCCTTCAAGAAGGGTTCTTCACGCTCTGTCAGCAAAAGTCAGGAGAACAAGTCATCTAGAGTATCAAAGTCATCAACTAATGCAAATAATTACGGTTCAGTTCCTTCTCAAAGTTCAAGTGTACCTGCAAACAATACTGAGGATGAAATGGATGATTTTGATCCAAGAGGAACCTCTACCAAAACTTCAGCAGGAAACTCTAACCAAGTTGATCTCTTTGGACAAGATTTAATTGGTGACTTCATGGATGCTCCAACATCTGTTCCTGTAGAGAAGCCAGCAACTGGTAATTTGCCAGAGGTTGATCTTTTTGCAGATGCATCATTTGTATCAGCAACACCTCAAATGGACAAAGGAGCCAGTTCTCAACCACAGGCTGAGGTGGATCTATTTGCTTCACAACCAGCCATTTCTGCAGTTACACCAACAGTTGACTTGTTTTCCATTCCTGAACCGGTAGTGCAACCAGACAGCAAGCCAGAGAAATCTGATCCTGTGAATAACAGCTCGTTTGATCCCTTTGCTGCTGTTCCTCTTAATAATTTTGATGGATCTGATATTTTTGGTGATTTTACTTCTCAATCTGATTCTGTGTCTTCCCAGCCCTCCGATAAAGTTGTCAGTGATGACAAACATGATAATATCACTGGTAAATCTTTAGCAGACTCTAAAGTTTTACCCAAAAAGGATACTTTCCAGGTGAAGTCTGGTGTCTGGGCTGATTCACTAAGTCGGGGACTGATTGATCTCAATATAACTGCCCCTAAAAAAGTAAACCTTGCGGACGTTGGAATTGTGGGTGGCTTGAGCGATGGATCCGACGAAAAGGAGAAAGGCCCTCCACCTTCATTTTTTATGGGTAGAGCTATGGGTTCAGGTTCTGGTCTTGGACTTGGTAGGCCTGGATTCTCTCCTTCACAACCAGCACCCGGAGACGACATTTTCTCAAACCTTGGTACCCAACAATATCAATTTGGTGGGTTCCAAAAGTAA 1692 0.4249 MDFMKVFDQTVREIKREVNLKVLKVPEIEQKVLDATDNEPWGPHGTALAEISQATKKFTECQMVMNVLWTRLGETGKDWRYVYKALAVIEYLVAHGSERAVDDIIEHTFQISALSSFEYVEPSGKDVGLNVRKKAENIVSLLNDRDKIHDVRNKAAANRDKYIGVSSSGITYKSGGSSSYSSGGSFQSSGKYGGFGSRDGDRFGDNNRDKVGSYDEDYQGKSHHSVASDNQDYSFKKGSSRSVSKSQENKSSRVSKSSTNANNYGSVPSQSSSVPANNTEDEMDDFDPRGTSTKTSAGNSNQVDLFGQDLIGDFMDAPTSVPVEKPATGNLPEVDLFADASFVSATPQMDKGASSQPQAEVDLFASQPAISAVTPTVDLFSIPEPVVQPDSKPEKSDPVNNSSFDPFAAVPLNNFDGSDIFGDFTSQSDSVSSQPSDKVVSDDKHDNITGKSLADSKVLPKKDTFQVKSGVWADSLSRGLIDLNITAPKKVNLADVGIVGGLSDGSDEKEKGPPPSFFMGRAMGSGSGLGLGRPGFSPSQPAPGDDIFSNLGTQQYQFGGFQK* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0332 563 MobiDBLite consensus disorder prediction 224 279 - -
Pvu1g0332 563 PANTHER EPSIN/ENT-RELATED 1 554 - -
Pvu1g0332 563 MobiDBLite consensus disorder prediction 426 452 - -
Pvu1g0332 563 MobiDBLite consensus disorder prediction 501 551 - -
Pvu1g0332 563 SMART enth_2 26 152 IPR013809 -
Pvu1g0332 563 ProSiteProfiles ENTH domain profile. 20 152 IPR013809 -
Pvu1g0332 563 MobiDBLite consensus disorder prediction 174 192 - -
Pvu1g0332 563 MobiDBLite consensus disorder prediction 438 452 - -
Pvu1g0332 563 SUPERFAMILY ENTH/VHS domain 7 152 IPR008942 -
Pvu1g0332 563 MobiDBLite consensus disorder prediction 174 303 - -
Pvu1g0332 563 PANTHER CLATHRIN INTERACTOR EPSIN 1 1 554 IPR033521 GO:0006623|GO:0030276
Pvu1g0332 563 Pfam ENTH domain 27 147 IPR013809 -
Pvu1g0332 563 MobiDBLite consensus disorder prediction 201 223 - -
Pvu1g0332 563 Gene3D - 19 165 IPR008942 -
Pvu1g0332 563 CDD ENTH 28 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0332 Pvu-Chr1 3156664 3164006 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0332 K12471 - gmx:100789110 930.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0332 1 3156664 3164006 Pvu1g0332 1 3156664 3164006 ECH