Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0331 ATGGGAAGAGCTCCTTGTTGTGACAAAGCCAATGTCAAAAGAGGACCATGGTCCCCTGAAGAAGATGCAGCACTCAAAACCTATGTGGACTCTCATGGAACTGGTGGAAATTGGATTGCATTGCCCAAAAAAGCTGGCCTTAGACGGTGTGGGAAGAGTTGCCGTCTACGGTGGCTGAATTATCTGAGACCAGACATCAAACATGGAGGCTTCACTGAGGAAGAAGACAACATCATTTGCAATCTCTATGGCCAGATGGGAAGCAGATGGTCTGCCATAGCCTCTAAGCTTCATGGCAGAACCGACAATGATGTGAAAAATTACTGGAACACAAAACTGAAGAAGAAGATGATAGCAGGAAAAGTTTGTCTCAAAACATTTACTGAAAATGGAATTCTTCCTTCAACTTCAACCCCATTACCAACCAACCAAAGTCTCAACATTCAAAATTCACCTTTCAATGCTTCACCAAATCAAACTTTGGTGCCACCAATCTTGGAAGCTAATGATAACAATGCATTCACCATTGATCAAAACAGCTTCATTAGTTTTGATCAAACGAATCATCATGAAGTCATGCATGGTGGTGCTGCAAGTTCAAGGATCAACAAAAACACCAATGATAATAACAGCAACAGTCACATGGTGTCACTGTCTCAAGAAGGTTCAAGCAGCATTTCGGATTCATCTTCAATTGCAATGAATTACAACAAGTGTGTCGTGTCACAGCCTCAACAACAACAGCAGCAACAAAGTGATGAATCCATGGACAAGTTCATGGATTTTGGCTTTGGATTTCCCTATGATTTTGCCAATGGTGCTAACTGCCATTATGAGAGAGTTGGTGAAGTTTTTGCTCCAGAATGGGTTGATTTTAGCTATGCTGACATTAAGCCACATTGA 903 0.4164 MGRAPCCDKANVKRGPWSPEEDAALKTYVDSHGTGGNWIALPKKAGLRRCGKSCRLRWLNYLRPDIKHGGFTEEEDNIICNLYGQMGSRWSAIASKLHGRTDNDVKNYWNTKLKKKMIAGKVCLKTFTENGILPSTSTPLPTNQSLNIQNSPFNASPNQTLVPPILEANDNNAFTIDQNSFISFDQTNHHEVMHGGAASSRINKNTNDNNSNSHMVSLSQEGSSSISDSSSIAMNYNKCVVSQPQQQQQQQSDESMDKFMDFGFGFPYDFANGANCHYERVGEVFAPEWVDFSYADIKPH* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0331 300 CDD SANT 71 113 IPR001005 -
Pvu1g0331 300 Gene3D - 70 117 - -
Pvu1g0331 300 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Pvu1g0331 300 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Pvu1g0331 300 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Pvu1g0331 300 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Pvu1g0331 300 SMART sant 13 64 IPR001005 -
Pvu1g0331 300 SMART sant 67 115 IPR001005 -
Pvu1g0331 300 MobiDBLite consensus disorder prediction 195 229 - -
Pvu1g0331 300 CDD SANT 16 62 IPR001005 -
Pvu1g0331 300 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Pvu1g0331 300 PANTHER OS09G0431300 PROTEIN 1 253 - -
Pvu1g0331 300 PANTHER OS09G0431300 PROTEIN 1 253 - -
Pvu1g0331 300 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Pvu1g0331 300 MobiDBLite consensus disorder prediction 199 229 - -
Pvu1g0331 300 Gene3D - 7 68 - -
Pvu1g0331 300 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0331 Pvu-Chr1 3147115 3149907 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0331 1 118 MYB Transcription Factor Family AT5G65790 81.356 5.02e-72 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pvu1g0331 Myb_DNA-binding 7.6e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0331 K09422 - gmx:100789985 402.134