Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0329 ATGAAGAGGTTTTCTGCCTTCTGCTTCACAAGCAGAATCTCTAAGTTTCACTCTCACAGGAAGCATAACCAATCTCAGATCATGGCAGGAAACATTTCTGATCCAAGTGGGAGCAAGGGTGCAAATATTTTACTTAATCATGACTTTTCTAGTGGCTTGAGCTCTTGGCATCTCAATTCCTGTTCTGGCTATGTGATTTCAGCTGAAACAGGTGCTCAAGGAGGAAATTCGATGCAGTTGAGTGCTAATTATGCTGTTATCACTGACCGAAAGAAATGCTGGCAAGGCCTTGAGCAAGACATCACAGATAGAATTTCCACTGGTTACACTTACTCGGTTTTGGCTTGTGTGGGAGTATCCCGTCTTTCTCAGGGATCTAGTGATGTTCTAGCTACTCTGAAACTAGAATATCATGATTCAGCTACTAGTTACTTGTTCATTGGAAGAACTTCTGTTAATAAGGATAGCTGGCAAAAGTTGGAAGGGACATTCTCATTGTCAACTAAGCCTGATAGGGTTGTATTTTATTTGGAAGGACCTGCTCCTGGAGTTGACCTGCTCATACGATCAGTAGAGATAAACTGTTCCACTCCAAATAATAATGTATGTTATGTACTTGCAAGGTTGCATCCATCATGTATTTTCTATAAAACAAGTGGAAGAATTTTTAGTTGGATCCAATTTGTGCAAGCGTTGTTAAATGTACTTGCAAGGTTGCATCCATCATTGCTCAAAGAAAGATAG 744 0.4019 MKRFSAFCFTSRISKFHSHRKHNQSQIMAGNISDPSGSKGANILLNHDFSSGLSSWHLNSCSGYVISAETGAQGGNSMQLSANYAVITDRKKCWQGLEQDITDRISTGYTYSVLACVGVSRLSQGSSDVLATLKLEYHDSATSYLFIGRTSVNKDSWQKLEGTFSLSTKPDRVVFYLEGPAPGVDLLIRSVEINCSTPNNNVCYVLARLHPSCIFYKTSGRIFSWIQFVQALLNVLARLHPSLLKER* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0329 247 Pfam Carbohydrate binding domain 41 182 IPR003305 GO:0016798
Pvu1g0329 247 SUPERFAMILY Galactose-binding domain-like 40 195 IPR008979 -
Pvu1g0329 247 PANTHER ENDO-1,4-BETA-XYLANASE A-LIKE 35 194 - -
Pvu1g0329 247 Coils Coil 245 247 - -
Pvu1g0329 247 Gene3D - 36 195 - -
Pvu1g0329 247 PANTHER GLYCOSYL HYDROLASE 35 194 IPR044846 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0329 Pvu-Chr1 3131586 3133313 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0329 1 193 Glycoside Hydrolase AT1G58370 44.019 9.03e-50 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0329 - - pvu:PHAVU_001G032400g 501.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0329 1 3131586 3133313 Pvu1g0329 1 3131586 3133313 ECH