Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0326 ATGGGCAGGGCTCCTTGCTGCGACAAAGCAAACGTGAAGAAAGGTCCATGGTCACCAGAAGAAGATGCTAAGCTCAAATCCTACATAGAAAAACATGGCACTGGTGGTAACTGGATTGCTTTGCCTCAAAAAATAGGCCTTAAGCGATGTGGCAAGAGTTGCCGTCTTAGGTGGCTAAACTATCTTCGCCCTAATCTCAGACACGGTGGTTTCTCCGAAGAAGAAGACAACATTATTTGCAGTCTTTACATCAGTATCGGAAGCAGGTGGTCGGTGATTGCAGCACAATTGCCAGGAAGAACTGATAATGACATAAAGAACTACTGGAACACGAGGCTGAAAAAGAAGCTTCTAGGGAAGCATCGAAGAGAGCCACGTAATAGAGGCAGTTACAACAGTGTTAGGCAAGAAATTAGTGATGCTAATAGAAGGAGTAGTGATGGTGATTCTTCTTCCTTATCCATGGTTCAGGAAAACAGTAGCACCAGTCAACAACAACAACAACCATGTTGGCCACAGAACATTAACATGCCTGTGCCACCACCACCAGTAGTAGTACCCTTGCCGTACACAGACCAAGGCCCAGGTTTCAACGACCAAGATTCTATCAAGAAACTCCTCATCAAACTTGGAGGAAGATTTTCAGGTGATTATTACCAGCCTACCCTTGAGGGGTTGAATCTTCAATTCTCATCAGAAGGGCAACAAGTTTACCAAGAGCAAGTCCATGTCGGTTCTTCTTCTTCCTCAGCCTGCATTGCCAACAACGAGGTACAATTTGCACAAACTGGTCAATACTCTGGAGTTGATGACTTGGTGCAAGGACAAGGTGGTAATTTCACTCCCTCATTTGAGGAAATGGTTCCTTCTTCAGATTATTCAGATGGGTTGGAGTTCTTGTACAATGAGGGCATGATCCATAAGATAGCTGACTCTACTACAACTACAACTACTTGCCACCAAAACACCAACACCACCACCACAAATTGGGGTGAAACCACCACTTCCATTTATCACCATCATTCACTTGCTTCCCATTTTCAAGGTCAAGGTGTGGCACAAGAATGTGCTCTGCAAGAGTTTAGCTACCCCGGGGCACAATAA 1104 0.4484 MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNLRHGGFSEEEDNIICSLYISIGSRWSVIAAQLPGRTDNDIKNYWNTRLKKKLLGKHRREPRNRGSYNSVRQEISDANRRSSDGDSSSLSMVQENSSTSQQQQQPCWPQNINMPVPPPPVVVPLPYTDQGPGFNDQDSIKKLLIKLGGRFSGDYYQPTLEGLNLQFSSEGQQVYQEQVHVGSSSSSACIANNEVQFAQTGQYSGVDDLVQGQGGNFTPSFEEMVPSSDYSDGLEFLYNEGMIHKIADSTTTTTTCHQNTNTTTTNWGETTTSIYHHHSLASHFQGQGVAQECALQEFSYPGAQ* 368
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0326 367 Gene3D - 70 143 - -
Pvu1g0326 367 CDD SANT 71 113 IPR001005 -
Pvu1g0326 367 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Pvu1g0326 367 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 117 IPR017930 -
Pvu1g0326 367 CDD SANT 16 62 IPR001005 -
Pvu1g0326 367 SMART sant 67 115 IPR001005 -
Pvu1g0326 367 SMART sant 13 64 IPR001005 -
Pvu1g0326 367 MobiDBLite consensus disorder prediction 119 177 - -
Pvu1g0326 367 PANTHER TRANSCRIPTION FACTOR MYB36-LIKE 1 311 - -
Pvu1g0326 367 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Pvu1g0326 367 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Pvu1g0326 367 Gene3D - 7 68 - -
Pvu1g0326 367 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Pvu1g0326 367 MobiDBLite consensus disorder prediction 131 173 - -
Pvu1g0326 367 PANTHER OS09G0431300 PROTEIN 1 311 - -
Pvu1g0326 367 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 66 IPR017930 -
Pvu1g0326 367 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pvu1g0326 Pvu-Chr1 3031372 3033489 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0326 1 209 MYB Transcription Factor Family AT3G49690 62.201 9.55e-86 260
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pvu1g0326 Myb_DNA-binding 1.4e-14 CL0123
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0326 K09422 - gmx:100800290 572.392
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0326 1 3031372 3033489 Pvu9g0770 9 12402422 12404230 PCT