Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0321 ATGGTGGATCCGTACGTTCTCGGCTGGATTCTGTGCTCCGTTCTGACTCTCTTCGCGCTCTACAGCCTCGCCTTCAGCGGAGAGAGCCGGCGTCGAGCTTCGCCGAAGGCGGAGAAGAGCATCGAGCTTTCGGAAACCGTGACCACCTCCACGAGTGAATGCAGATCGGAGAAACGCGACGCCGACGTTGACGTCATTATTGTCGGAGCCGGTGTAGCCGGCGCGGCTCTAGCGCACACTCTCGGAAAGGATGGGCGTCGAGTACACGTCATTGAAAGAGATCTGAGTGAGCCTGATCGTATTGTTGGAGAGTTGTTACAACCAGGTGGCTATCTCAAATTGATTGAGCTGGGTCTTGAAGACTGTGTAGACAAAATTGATGCTCAGCAAGTGTTTGGTTATGCCCTTTTTAAGGATGGGAAACATACTCGTCTCGCTTACCCCTTGGAGAAGTTTCACTCAGATATCTCTGGCAGGAGCTTTCACAATGGTCGCTTCATTCAGAGGATGCGGGAAAAGGCTTCCACCCTTCCCAATGTGCGATTAGAGCAAGGAACAGTCACTTCCCTTGTTGAAGAGAAGGGGACAATTAAAGGTGTGCAATATAAGAACAAAGATGGCCAGGAATTGACAACATTTGCACCTCTTACCATTGTTTGTGATGGCTGCTTCTCAAACTTACGCCGTTCTCTTTGTAATCCTAAGGTTGATGTTCCCTCATGTTTTGTTGGTTTACTTTTAGAGAACTGTGAGCTTCCATGTGCAAATCATGGCCACGTTATACTGGGAGACCCTTCACCAATTCTATTCTATCGTATAAGTAGTACAGAGATTCGCTGTCTGGTCGATGTACCTGGTAAGAAGGTTCCTTCTATTTCAAACGGTGAAATGGAAAAGTATTTGAAGACAACAGTAGCTCCCCAGATTCCCCCAGAACTTTATGATGCCTTCATAGCTGCTGTGGACAAGGGCAACATAAGGACAATGCCAAACAGAAGCATGCCGGCAGATCCCCTTCCTACACCTGGAGCCCTTCTGATGGGAGATGCATTCAACATGCGGCATCCACTAACTGGAGGCGGAATGACTGTGGCATTGTCTGATATTGTGGTGCTGAGAAATCTTCTAAGGCCCTTGCCTGATCTGAATGACGCACCCACTCTCTGCAAGTACCTCGAATCCTTTTATACCTTGCGTAAGCCTGTGGCATCCACAATAAATACATTGGCAGGTGCTCTTTACAAAGTTTTTTGTGCATCCCCTGATCAGGCAAGGAAGGAAATGCGCCAAGCTTGCTTTGATTATCTAAGCCTTGGAGGCCTATTCTCCGAAGGACCAGTTTCTCTACTTTCAGGATTAAACCCTCGTCCCTTGAGTTTGGTTCTCCATTTCTTTGCTGTTGCAATATATGGTGTGGGCCGTTTATTGTTACCGTTCCCTTCACCTAAGAGAGTATGGATTGGGGCCCGACTAATCTCTGGTGCTTCTGGAATCATCTTCCCCATAATCAAGGCGGAAGGGATTCGTCAAATGTTTTTCCCTGTGACTGTTCCAGCTTATTACAGAACTCCCCCGGTTGGACAATAG 1587 0.4789 MVDPYVLGWILCSVLTLFALYSLAFSGESRRRASPKAEKSIELSETVTTSTSECRSEKRDADVDVIIVGAGVAGAALAHTLGKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVDKIDAQQVFGYALFKDGKHTRLAYPLEKFHSDISGRSFHNGRFIQRMREKASTLPNVRLEQGTVTSLVEEKGTIKGVQYKNKDGQELTTFAPLTIVCDGCFSNLRRSLCNPKVDVPSCFVGLLLENCELPCANHGHVILGDPSPILFYRISSTEIRCLVDVPGKKVPSISNGEMEKYLKTTVAPQIPPELYDAFIAAVDKGNIRTMPNRSMPADPLPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLRPLPDLNDAPTLCKYLESFYTLRKPVASTINTLAGALYKVFCASPDQARKEMRQACFDYLSLGGLFSEGPVSLLSGLNPRPLSLVLHFFAVAIYGVGRLLLPFPSPKRVWIGARLISGASGIIFPIIKAEGIRQMFFPVTVPAYYRTPPVGQ* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0321 528 Pfam Squalene epoxidase 213 486 IPR013698 GO:0004506|GO:0016021|GO:0050660
Pvu1g0321 528 SUPERFAMILY FAD/NAD(P)-binding domain 62 437 IPR036188 -
Pvu1g0321 528 PANTHER SQUALENE MONOOXYGENASE-RELATED 1 528 - -
Pvu1g0321 528 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 64 86 - -
Pvu1g0321 528 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 213 228 - -
Pvu1g0321 528 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 341 356 - -
Pvu1g0321 528 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 356 372 - -
Pvu1g0321 528 Gene3D - 56 436 IPR036188 -
Pvu1g0321 528 Pfam NAD(P)-binding Rossmann-like domain 67 93 - -
Pvu1g0321 528 PANTHER SQUALENE MONOOXYGENASE 1 528 IPR040125 GO:0004506|GO:0016126
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0321 Pvu-Chr1 2985079 2989796 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0321 45 528 Miscellaneous Gene Families AT1G58440 79.671 0.0 813
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0321 K00511 - gmx:100804406 951.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0321 1 2985079 2989796 Pvu1g0321 1 2985079 2989796 ECH
Pvu1g0321 1 2985079 2989796 Pvu9g0765 9 12316917 12321119 PCT