Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0315 ATGGATCTTGGGGTGGTGGGTTTGGAGGGGTTGGTGGGTTCAGACAGTAGTTGCGCCTTTGGTTCTTCTCTTGCTTCAGATCCTGAGACAAAACACAAGTGGTACGGATCTGGGGTGCTCAAGCAAGAGAGATCTGGCGCAGCAAGTGAAGATGAGTGGAGGACTTCAAAAGTGCCTAAAACTGATGACAACATGTCTGCTGCATCCAAAGCAATGCTCTTTCACCAGAGGAACTCTCTGCTGAGATCTAATGTCACGCTTTTCTCTGAGGGCCACAACCAACCACAAATGCTGAGCTTCTCTTCACCAAAATCAGAGCCTTTGCTGGTGGACAAGGCCTCCTTAAATGCCACATTGCCTTTTTCTTACCACCAATTGTCTAGTTACAGCAGAAATACAGGTTACAGTTCGGGAAGCATAAGCATGCATGGGGCTTTGTCTGGTATGAGAGGGCCATTCACGCCTTCACAGTGGATGGAACTTGAACACCAAGCTTTGATCTACAAGTACATCACAGCAAACGTCCCTGTACCAACTCATCTTCTCATACCCATCAGAAAAGCACTCGATTCTGCTGCCTTCTGCAACTTTTCAACCGGACTCCTCAGACCCAACACATTGGGATGGGGAGGTTTCCATCTGGGATTCTCGAACAACACAGACCCTGAGCCAGGGAGGTGTAGGAGAACAGATGGGAAGAAATGGCGGTGCTCGAGAGATGCCGTAGTTGATCAGAAATATTGCGAGCGGCACATGAACAGAGGACGCCATCGTTCAAGAAAGCCTGTGGAAGGCCAATCAGGCCATGCCCTCACCACCACTACCACCACAACAACCACCACTACTCCTCCTAATGCTTCCTCAAACTCCATTGTGGTGCCCGGCAACAACAACAATAACAACACCTTTGCACACAACAATGTGCACCACCCTCTCCCATCTCATTCCTCTTCAGCCAACACCATCAACAGGATGTTTATGAGTAACAAAGAGAACAATAACAACGCTAGTGAGAGGATGCAGGATGGCCCTGCACTTCCCATGGTGCCTCCAACTCTTGAGCTGAAACCAAAGGACCCTTTCATGATTCATAAACACCAACTCCCATATGATGAATCATCCTCAAGGAACAACAATGAGTTTGGGCTTGTCACTTCTGATTCCTTGCTCAACCCTTCACAGAAGAGAAGCTTTGGTTCATCATCTTCACAAAAGGATGATTCTGAGTCCCAACAACAACATCATCCCCTCAGGCACTTCATTGACGACTCTCCCAAACCACAGTCTCATCATCACCATCATCGTTCTTCTGTGTGGCCTGAACTTGACAACATGCAGTCAGATAGGACTCAGTTATCAATCTCCATACCCATATCTTCCTCAGATTTCATGTCATTCGCTACCTCCTCACCCTCTAATGAGAAACTCACATTGTCACCACTAAGGCTTTCAAGGGAATTAGACCCCATTCAAATGGGGTTGGGAGTGGGAAGTGGTGCTCCCAATGAATCAAACACTAGGCAAGCCAATTGGATTCCAATCACTTGGGAGAGTTCTATGGGTGGTCCTCTTGGTGAGGTTTTGAACCTGAGTAGCAGTAATAACAACAGCAATGGAAGTGATCACTGTGGCAAGAACACTTCTGCTCTCAACCTCATGAAAGATGGGTGGGACAATAGTCCTCCCCTAGGCTCATCCCCTAACGGGGTGTTGCAAAAAACAGCATTTGGATCACTTTCCAATAGCAGTGCTGGAAGCAGTCCAAGGGCAGACAACAACAATAACAAAGAAAGTGCCAGTGCCACCACACTGTGCAATGCCTTGTGA 1827 0.4767 MDLGVVGLEGLVGSDSSCAFGSSLASDPETKHKWYGSGVLKQERSGAASEDEWRTSKVPKTDDNMSAASKAMLFHQRNSLLRSNVTLFSEGHNQPQMLSFSSPKSEPLLVDKASLNATLPFSYHQLSSYSRNTGYSSGSISMHGALSGMRGPFTPSQWMELEHQALIYKYITANVPVPTHLLIPIRKALDSAAFCNFSTGLLRPNTLGWGGFHLGFSNNTDPEPGRCRRTDGKKWRCSRDAVVDQKYCERHMNRGRHRSRKPVEGQSGHALTTTTTTTTTTTPPNASSNSIVVPGNNNNNNTFAHNNVHHPLPSHSSSANTINRMFMSNKENNNNASERMQDGPALPMVPPTLELKPKDPFMIHKHQLPYDESSSRNNNEFGLVTSDSLLNPSQKRSFGSSSSQKDDSESQQQHHPLRHFIDDSPKPQSHHHHHRSSVWPELDNMQSDRTQLSISIPISSSDFMSFATSSPSNEKLTLSPLRLSRELDPIQMGLGVGSGAPNESNTRQANWIPITWESSMGGPLGEVLNLSSSNNNSNGSDHCGKNTSALNLMKDGWDNSPPLGSSPNGVLQKTAFGSLSNSSAGSSPRADNNNNKESASATTLCNAL* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0315 608 MobiDBLite consensus disorder prediction 561 608 - -
Pvu1g0315 608 MobiDBLite consensus disorder prediction 368 442 - -
Pvu1g0315 608 PANTHER GROWTH-REGULATING FACTOR 9 26 596 - -
Pvu1g0315 608 Pfam QLQ 152 186 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pvu1g0315 608 MobiDBLite consensus disorder prediction 266 319 - -
Pvu1g0315 608 MobiDBLite consensus disorder prediction 527 608 - -
Pvu1g0315 608 SMART QLQ_2 151 187 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pvu1g0315 608 MobiDBLite consensus disorder prediction 372 407 - -
Pvu1g0315 608 PANTHER - 26 596 IPR031137 GO:0005634|GO:0006351|GO:0032502
Pvu1g0315 608 MobiDBLite consensus disorder prediction 333 356 - -
Pvu1g0315 608 MobiDBLite consensus disorder prediction 527 547 - -
Pvu1g0315 608 ProSiteProfiles WRC domain profile. 221 265 IPR014977 -
Pvu1g0315 608 MobiDBLite consensus disorder prediction 408 439 - -
Pvu1g0315 608 Pfam WRC 222 264 IPR014977 -
Pvu1g0315 608 ProSiteProfiles QLQ domain profile. 152 187 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pvu1g0315 608 MobiDBLite consensus disorder prediction 250 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0315 Pvu-Chr1 2848754 2853293 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0315 41 596 GRF Transcription Factor Family AT2G22840 43.056 1.21e-109 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Pvu1g0315 WRC 5.7e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0315 - - gmx:100818860 955.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0315 1 2848754 2853293 Pvu1g0315 1 2848754 2853293 ECH