Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0305 ATGTCTTCATCGGAGTCTCAAGACCCGGCTGCTGCATCGGAGGTCCAGCTTAGCAAAAAGGCCGCCAAGAAGGAGGCCGCCAAGGCGGACAAACTCCGCCGCCGCCAGGAAATCGCCGCCGCGTCCGCCGCCACTGCAAATCTGTCCGTCGACGAGGATGACCCCCTCGCCGCAAACTACGGCGACGTGCCGCTTGTCGAGCTGCAGTCCAAGACGCCCGCCAACGTTGACGACTGGACGCCCGTGGAGGCGCTCGGAGTCGCGCTCGAGAACAAGACGGTGCTGATCCGAGGTACGGCGCAGACTATTCGGCCGGTCGGGAAGAAGATGGCGTTCTTAGTCATAAGAGATGACTACTTCACGGTTCAGTGCCTGGTGCAGGCTCAGCCCGACACGGTGAGCCCGCAGATGGTGAAGTTCGCCGCCTCTCTCAACCGCGAATCCATTGTGGATGTCGAAGGTGTTGTTACGATCCCCACAGCTCCCATCAAAGGTGCCACCCAGCAGGTGGAAATTCAAGTGAGGAAGTTACATTGCATCAGTAGGGCTATGCCTACTCTGCCTATTAATCTTGATGATGCTGCTCGGAGTGAGATTGAAATTGAGAAGGCTATTCAGGCTGGTGAACAACTGGTTCGTGTTAATCAGGACACACGATTGAACTTCAGAGTGCTTGACCTGCGAACACCAGCTAATCAAGGAATTTTCAGTGTTCAGTCTCACGTTTCCAATGCATTTAGACAGTTCTTATTATCTGAAGGTTTTCGTGAAATCCACACTCCAAAGTTGATTGCTGGATCTAGTGAGGGTGGAGCTTCTGTTTTCAGACTGGACTACAAAGGCCAACCTGCATGCCTGGCCCAGTCACCTCAGCTTCACAAGCAAATGTGCATATGTGCACGTTTTGGTCGTGTTTTTGAGATTGGTCCTGTATTTAGAGCAGAAGATTCCTACACTCACAGGCATCTGTGTGAGTTTACAGGTCTTGATCTTGAAATGGAGATTAAGAAGCATTATTTTGAGGTCATGGATGTAGTTGATAGATTATTTGTCGCAATGTTTGACAGTTTGAACCAACATTGTAAGAAAGATCTGGAAGCTATTGGGTCCCAGTACCCCTTTGAACCTTTAAAGTATCTGCGGAATACACTACGGCTAACATATGAAGAAGGGATTCAGATGCTCAAGGATGTTGGAGTAGAAATTGAACCTTTTGGTGACTTGAATACTGAAGCGGAAAGGAAATTGGGTCAACTAGTGTTGGAGAAGTATGGCACTGAGTTCTACATGCTTCATCGATATCCTTTGGCTGTAAGGCCATTTTATACCATGCCTTGCTATGACAATCCAGCATACAGCAACTCGTTTGATGTCTTTATTCGAGGTGAGGAGATAATTTCAGGAGCTCAGCGTGTTCATGTGCCAGAACTTTTGGAACAACGTGCAGCAGCTTGCGGCATTGATGTGAAGACAATATCTACCTACATTGATGCTTTCAGATATGGTGCACCGCTACATGGTGGTTTTGGAGTAGGGTTGGAACGTGTTGTGATGCTCTTCTGTGGCCTCAATAACATTCGCAAAACATCGCTCTTCCCTCGTGACCCACTTAGGATTGCGCCATGA 1626 0.4902 MSSSESQDPAAASEVQLSKKAAKKEAAKADKLRRRQEIAAASAATANLSVDEDDPLAANYGDVPLVELQSKTPANVDDWTPVEALGVALENKTVLIRGTAQTIRPVGKKMAFLVIRDDYFTVQCLVQAQPDTVSPQMVKFAASLNRESIVDVEGVVTIPTAPIKGATQQVEIQVRKLHCISRAMPTLPINLDDAARSEIEIEKAIQAGEQLVRVNQDTRLNFRVLDLRTPANQGIFSVQSHVSNAFRQFLLSEGFREIHTPKLIAGSSEGGASVFRLDYKGQPACLAQSPQLHKQMCICARFGRVFEIGPVFRAEDSYTHRHLCEFTGLDLEMEIKKHYFEVMDVVDRLFVAMFDSLNQHCKKDLEAIGSQYPFEPLKYLRNTLRLTYEEGIQMLKDVGVEIEPFGDLNTEAERKLGQLVLEKYGTEFYMLHRYPLAVRPFYTMPCYDNPAYSNSFDVFIRGEEIISGAQRVHVPELLEQRAAACGIDVKTISTYIDAFRYGAPLHGGFGVGLERVVMLFCGLNNIRKTSLFPRDPLRIAP* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0305 541 CDD AspRS_cyto_N 93 193 - -
Pvu1g0305 541 PRINTS Aspartyl-tRNA synthetase signature 286 298 IPR002312 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Pvu1g0305 541 PRINTS Aspartyl-tRNA synthetase signature 303 316 IPR002312 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Pvu1g0305 541 PRINTS Aspartyl-tRNA synthetase signature 456 472 IPR002312 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Pvu1g0305 541 PRINTS Aspartyl-tRNA synthetase signature 496 510 IPR002312 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Pvu1g0305 541 Pfam tRNA synthetases class II (D, K and N) 216 535 IPR004364 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Pvu1g0305 541 PANTHER ASPARTATE--TRNA LIGASE, CYTOPLASMIC 9 541 - -
Pvu1g0305 541 SUPERFAMILY Nucleic acid-binding proteins 58 186 IPR012340 -
Pvu1g0305 541 SUPERFAMILY Class II aaRS and biotin synthetases 211 538 IPR045864 -
Pvu1g0305 541 CDD AsxRS_core 213 536 - -
Pvu1g0305 541 MobiDBLite consensus disorder prediction 1 31 - -
Pvu1g0305 541 Hamap Aspartate--tRNA(Asp) ligase [aspS]. 71 541 IPR004523 GO:0000166|GO:0004815|GO:0005524|GO:0005737|GO:0006422
Pvu1g0305 541 Pfam OB-fold nucleic acid binding domain 94 178 IPR004365 GO:0003676
Pvu1g0305 541 PANTHER ASPARTYL-TRNA SYNTHETASE 9 541 IPR004523 GO:0000166|GO:0004815|GO:0005524|GO:0005737|GO:0006422
Pvu1g0305 541 TIGRFAM aspS_nondisc: aspartate--tRNA(Asn) ligase 88 541 IPR004523 GO:0000166|GO:0004815|GO:0005524|GO:0005737|GO:0006422
Pvu1g0305 541 ProSiteProfiles Aminoacyl-transfer RNA synthetases class-II family profile. 236 533 IPR006195 -
Pvu1g0305 541 Gene3D - 57 184 IPR012340 -
Pvu1g0305 541 Gene3D Bira Bifunctional Protein; Domain 2 188 541 IPR045864 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0305 K22503 - gmx:100811577 950.658